Os11g0616900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0616900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.2 | 0.468 | 6.02 | -0.836 | 0.713 | 1.6 | -0.202 | 2.31 | 0.246 | 2.75 | 20.7 | 1416 | -- | -- |
| 107.51 | 0.483 | 6.09 | -1.23 | 0.664 | 1.2 | -0.0929 | -- | 0.131 | 2.91 | 21.33 | 1234 | -- | -- |
| 96.55 | 0.458 | 6.02 | -0.661 | 0.701 | 1.42 | -- | 2.33 | 0.252 | 2.69 | 21.3 | 1368 | -- | -- |
| 107.36 | 0.483 | 6.1 | -1.16 | 0.63 | 1.09 | -- | -- | 0.124 | 2.97 | 22 | 1148 | -- | -- |
| 123.52 | 0.518 | 6.02 | -0.66 | -- | 1.43 | -- | 2.23 | 0.278 | -- | 21.4 | 1235 | -- | -- |
| 150.63 | 0.575 | 6.02 | -0.744 | 0.756 | -- | -0.196 | -- | 0.466 | 2.7 | -- | -- | -- | -- |
| 150.76 | 0.575 | 6.02 | -0.739 | 0.755 | -- | -- | -- | 0.467 | 2.68 | -- | -- | -- | -- |
| 130.5 | 0.532 | 6.1 | -1.13 | -- | 1.16 | -- | -- | 0.111 | -- | 22.1 | 1085 | -- | -- |
| 136.37 | 0.544 | 6.06 | -- | 0.642 | 0.799 | -- | -- | 0.302 | 3.33 | 22.4 | 971 | -- | -- |
| 184.01 | 0.634 | 6.02 | -0.707 | -- | -- | -- | -- | 0.486 | -- | -- | -- | -- | -- |
| 165.16 | 0.601 | 6 | -- | 0.741 | -- | -- | -- | 0.549 | 2.66 | -- | -- | -- | -- |
| 159.68 | 0.589 | 6.06 | -- | -- | 0.886 | -- | -- | 0.291 | -- | 22.3 | 1028 | -- | -- |
| 197.19 | 0.655 | 6 | -- | -- | -- | -- | -- | 0.564 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 4 | 100.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 11 | 100.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 7 |
| 21 | 100.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 34 | 100.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 35 | 100.94 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 98 | 101.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 103 | 101.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 121 | 101.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 179 | 101.57 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 229 | 101.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 253 | 101.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 7 |
| 431 | 102.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 665 | 103.92 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 671 | 103.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 680 | 103.97 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 732 | 104.21 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 760 | 104.38 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 764 | 104.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 792 | 104.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 795 | 104.55 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 800 | 104.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 16 |
| 801 | 104.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 864 | 104.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 21 |
| 874 | 104.83 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 893 | 104.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 896 | 104.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 922 | 105.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 11 |
| 938 | 105.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 954 | 105.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 978 | 105.20 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 983 | 105.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 990 | 105.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |