FiT-DB / Search/ Help/ Sample detail

Os11g0616200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.05 (0.0248) R2 : 0.532
β1 : 0.8 (0.0909) R2dD : 0.0835 R2D : 0.067
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.22 (0.0574) R2dE : 0.468 R2E : 0.451
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0708 (0.0532) R2dN8 : 0.0023 R2N8 : -0.00822
σ : 0.464
deviance : 99.16
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 5.362
memory length : 94
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.23
open length of G : 5.05

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
95.62 0.459 8.04 0.844 0.19 -1.31 -0.82 0.0953 0.086 8.81 5.372 96 3.22 5.17
95.63 0.455 8.04 0.835 0.191 -1.31 -0.766 -- 0.0862 8.94 5.391 96 3.22 5.14
97.14 0.459 8.05 0.779 0.186 -1.25 -- -0.253 0.0765 10.9 5.4 96 3.24 5.15
97.35 0.46 8.05 0.812 0.186 -1.27 -- -- 0.0827 10.8 5.304 97 3.24 5.1
98.94 0.463 8.05 0.783 -- -1.21 -- -0.302 0.0756 -- 5.239 92 3.27 5.1
145.17 0.565 8.09 0.749 0.981 -- 0.782 -- -0.0173 17.5 -- -- -- --
146.63 0.567 8.09 0.747 0.985 -- -- -- -0.0136 17.4 -- -- -- --
99.16 0.464 8.05 0.8 -- -1.22 -- -- 0.0708 -- 5.362 94 3.23 5.05
114.47 0.498 8.07 -- 0.165 -1.23 -- -- -0.00974 11.4 5.621 96 3.31 5.02
197.18 0.656 8.07 0.714 -- -- -- -- -0.0379 -- -- -- -- --
161.34 0.594 8.1 -- 0.972 -- -- -- -0.0968 17.4 -- -- -- --
115.96 0.502 8.07 -- -- -1.21 -- -- -0.0256 -- 5.639 115 3.07 5.02
210.62 0.677 8.09 -- -- -- -- -- -0.117 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 97.34 wind 5.0 90 < th dose independent rect. 3 5
2 97.60 precipitation 0.1 90 < th dose independent rect. 3 5
3 97.60 precipitation 0.1 90 < th dose dependent rect. 3 5
6 98.28 temperature 10.0 90 > th dose independent rect. 3 5
8 98.28 temperature 30.0 90 < th dose independent rect. 3 5
9 98.28 humidity 50.0 90 > th dose independent rect. 3 5
11 98.28 atmosphere 995.0 90 > th dose independent rect. 3 5
12 98.28 atmosphere 1015.0 90 < th dose independent rect. 3 5
13 98.28 temperature 10.0 90 > th dose independent rect. 8 19
14 98.46 radiation 40.0 90 < th dose independent rect. 3 5
15 98.49 precipitation 0.1 90 < th dose independent rect. 8 19
16 98.49 precipitation 0.1 90 < th dose dependent rect. 8 19
17 98.53 precipitation 0.1 270 < th dose independent rect. 3 3
18 98.53 precipitation 0.1 270 < th dose dependent rect. 3 3
26 99.12 wind 9.0 90 < th dose independent rect. 8 19
30 99.38 radiation 40.0 90 < th dose independent rect. 13 19
44 99.49 temperature 10.0 270 > th dose independent rect. 6 20
58 99.63 precipitation 0.1 270 < th dose independent rect. 1 6
59 99.63 precipitation 0.1 270 < th dose dependent rect. 1 6
60 99.64 wind 5.0 270 < th dose independent rect. 1 6
76 99.71 radiation 40.0 270 < th dose dependent rect. 3 3
82 99.81 radiation 1.0 270 < th dose dependent rect. 3 2
85 99.94 atmosphere 995.0 90 > th dose independent rect. 8 19
88 99.98 radiation 1.0 270 < th dose independent rect. 3 2
90 100.00 wind 9.0 270 < th dose independent rect. 6 21
93 100.25 radiation 20.0 270 < th dose independent rect. 1 6
94 100.27 wind 9.0 90 < th dose dependent rect. 3 5
96 100.32 humidity 70.0 270 > th dose independent rect. 1 6
97 100.33 temperature 10.0 270 > th dose independent rect. 1 6
99 100.33 temperature 30.0 270 < th dose independent rect. 1 6
100 100.33 humidity 50.0 270 > th dose independent rect. 1 6
102 100.33 atmosphere 995.0 270 > th dose independent rect. 1 6
103 100.33 atmosphere 1015.0 270 < th dose independent rect. 1 6
107 100.38 wind 9.0 270 < th dose dependent rect. 3 3
109 100.48 temperature 30.0 270 < th dose dependent rect. 3 2
110 100.51 precipitation 0.1 270 < th dose independent rect. 6 20
111 100.51 precipitation 0.1 270 < th dose dependent rect. 6 20
113 100.73 precipitation 0.1 90 < th dose independent rect. 8 6
114 100.73 precipitation 0.1 90 < th dose dependent rect. 8 6
116 100.79 radiation 40.0 270 < th dose dependent rect. 1 6
124 101.08 radiation 1.0 90 > th dose independent rect. 8 6
128 101.12 atmosphere 1015.0 90 < th dose independent rect. 8 19
129 101.14 temperature 10.0 90 > th dose independent rect. 8 6
130 101.14 atmosphere 995.0 90 > th dose independent rect. 8 6
131 101.14 atmosphere 1015.0 90 < th dose independent rect. 8 6
132 101.14 temperature 10.0 90 > th dose independent rect. 14 18
133 101.21 temperature 10.0 270 > th dose independent rect. 6 7
134 101.21 atmosphere 995.0 270 > th dose independent rect. 6 7
135 101.21 atmosphere 1015.0 270 < th dose independent rect. 6 7
136 101.21 precipitation 0.1 270 < th dose independent rect. 6 7
138 101.21 precipitation 0.1 270 < th dose dependent rect. 6 7
142 101.26 precipitation 0.1 270 < th dose independent rect. 13 17
143 101.26 precipitation 0.1 270 < th dose dependent rect. 13 17
150 101.48 wind 1.0 270 > th dose independent rect. 1 6
152 101.54 wind 9.0 270 < th dose independent rect. 6 7
163 101.78 wind 9.0 270 < th dose independent rect. 13 17
165 101.86 humidity 50.0 270 > th dose independent rect. 6 7
178 102.06 wind 1.0 90 > th dose independent rect. 8 6
181 102.15 radiation 1.0 10 > th dose independent rect. 9 5
183 102.18 humidity 50.0 270 > th dose independent rect. 9 1
184 102.19 wind 9.0 90 < th dose independent rect. 8 6
190 102.27 humidity 50.0 270 > th dose dependent rect. 3 3
192 102.31 precipitation 0.1 270 < th dose independent rect. 9 1
193 102.31 precipitation 0.1 270 < th dose dependent rect. 9 1
195 102.33 temperature 10.0 270 > th dose independent rect. 9 1
196 102.33 atmosphere 995.0 270 > th dose independent rect. 9 1
197 102.33 atmosphere 1015.0 270 < th dose independent rect. 9 1
198 102.33 temperature 10.0 270 > th dose independent rect. 10 23
220 102.39 wind 9.0 270 < th dose independent rect. 9 1
222 102.42 precipitation 0.1 270 < th dose independent rect. 2 15
223 102.42 precipitation 0.1 270 < th dose dependent rect. 2 15
239 102.66 temperature 10.0 10 > th dose independent rect. 9 5
241 102.66 atmosphere 995.0 10 > th dose independent rect. 9 5
242 102.66 atmosphere 1015.0 10 < th dose independent rect. 9 5
243 102.66 precipitation 0.1 10 < th dose independent rect. 9 5
244 102.66 precipitation 0.1 10 < th dose independent rect. 3 6
245 102.66 temperature 10.0 10 > th dose independent rect. 14 19
246 102.66 precipitation 0.1 10 < th dose dependent rect. 9 5
247 102.66 precipitation 0.1 10 < th dose dependent rect. 3 6
251 102.78 radiation 10.0 270 < th dose independent rect. 17 9
252 102.80 atmosphere 995.0 270 > th dose independent rect. 6 20
268 102.86 precipitation 0.1 10 < th dose independent rect. 9 18
270 102.86 precipitation 0.1 10 < th dose dependent rect. 9 18
290 103.07 radiation 40.0 270 < th dose dependent rect. 17 9
293 103.10 wind 9.0 270 < th dose independent rect. 17 9
297 103.14 wind 7.0 10 < th dose independent rect. 3 6
303 103.17 radiation 1.0 270 > th dose independent rect. 8 2
306 103.18 precipitation 0.1 270 < th dose independent rect. 10 22
307 103.18 precipitation 0.1 270 < th dose dependent rect. 10 22
309 103.20 temperature 10.0 270 > th dose independent rect. 17 9
313 103.20 temperature 10.0 270 > th dose independent rect. 2 15
314 103.20 atmosphere 1015.0 270 < th dose independent rect. 2 15
323 103.25 wind 9.0 10 < th dose independent rect. 14 19
325 103.26 wind 1.0 270 > th dose independent rect. 9 1
353 103.41 wind 9.0 270 < th dose independent rect. 10 22
355 103.41 wind 9.0 270 < th dose dependent rect. 1 6
371 103.53 radiation 40.0 10 < th dose independent rect. 14 19
376 103.56 humidity 50.0 90 > th dose independent rect. 8 6
380 103.61 temperature 10.0 43200 > th dose independent rect. 10 5
382 103.63 wind 1.0 270 > th dose independent rect. 3 2
413 103.73 wind 9.0 270 < th dose independent rect. 2 15
414 103.75 wind 9.0 10 < th dose independent rect. 9 5
416 103.75 temperature 10.0 10 > th dose independent rect. 3 6
418 103.75 temperature 30.0 10 < th dose independent rect. 3 6
419 103.75 humidity 50.0 10 > th dose independent rect. 3 6
421 103.75 atmosphere 995.0 10 > th dose independent rect. 3 6
422 103.75 atmosphere 1015.0 10 < th dose independent rect. 3 6
423 103.75 temperature 10.0 10 > th dose independent rect. 9 18
430 103.80 humidity 50.0 270 > th dose independent rect. 7 4
431 103.82 precipitation 0.1 10 < th dose independent rect. 14 19
432 103.82 precipitation 0.1 10 < th dose dependent rect. 14 19
436 103.85 humidity 50.0 270 > th dose independent rect. 17 9
441 103.92 temperature 10.0 43200 > th dose independent rect. 9 7
447 103.96 atmosphere 995.0 90 > th dose independent rect. 14 18
456 104.01 temperature 10.0 270 > th dose independent rect. 11 20
460 104.09 radiation 1.0 270 > th dose independent rect. 6 7
472 104.12 precipitation 0.1 270 < th dose independent rect. 11 20
474 104.12 precipitation 0.1 270 < th dose dependent rect. 11 20
492 104.26 atmosphere 1015.0 270 < th dose independent rect. 6 20
496 104.30 temperature 10.0 1440 > th dose independent rect. 10 5
500 104.30 temperature 10.0 1440 > th dose independent rect. 15 19
506 104.35 atmosphere 995.0 270 > th dose independent rect. 17 9
507 104.36 humidity 50.0 270 > th dose independent rect. 6 20
555 104.48 temperature 30.0 90 < th dose dependent rect. 3 5
586 104.61 precipitation 0.1 270 < th dose independent rect. 17 9
587 104.61 wind 9.0 270 < th dose independent rect. 11 20
589 104.61 precipitation 0.1 270 < th dose dependent rect. 17 9
609 104.79 atmosphere 995.0 10 > th dose independent rect. 9 18
617 104.81 humidity 50.0 90 > th dose independent rect. 8 19
640 104.87 wind 9.0 10 < th dose independent rect. 9 18
646 104.90 wind 1.0 270 > th dose independent rect. 12 18
661 105.00 temperature 10.0 90 > th dose dependent rect. 3 5
677 105.07 atmosphere 995.0 90 > th dose dependent rect. 3 5
689 105.19 humidity 50.0 270 > th dose dependent rect. 1 6
696 105.23 temperature 10.0 270 > th dose dependent rect. 3 3
733 105.41 atmosphere 995.0 10 > th dose independent rect. 14 19
734 105.41 wind 9.0 270 < th dose dependent rect. 8 2
799 105.66 wind 1.0 90 > th dose independent rect. 8 19
800 105.66 atmosphere 1015.0 270 < th dose dependent rect. 3 2
816 105.69 radiation 1.0 270 < th dose dependent rect. 3 9
817 105.72 wind 1.0 270 > th dose independent rect. 6 7
825 105.76 atmosphere 1015.0 10 < th dose independent rect. 9 18
885 106.03 humidity 90.0 90 < th dose independent rect. 8 6
898 106.10 temperature 10.0 1440 > th dose independent rect. 4 6
901 106.10 atmosphere 995.0 1440 > th dose independent rect. 4 6
902 106.10 atmosphere 1015.0 1440 < th dose independent rect. 4 6
903 106.10 temperature 10.0 1440 > th dose independent rect. 10 18
966 106.36 temperature 10.0 90 > th dose dependent rect. 8 5
987 106.46 atmosphere 995.0 270 > th dose independent rect. 2 15
1000 106.49 temperature 10.0 270 > th dose dependent rect. 8 2