Os11g0615900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0615900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.11 | 0.526 | 8.12 | 0.0455 | 1.61 | -1.21 | -0.471 | -1.74 | 0.38 | 19.8 | 5.401 | 544 | -- | -- |
| 126.67 | 0.524 | 8.14 | 0.0803 | 1.59 | -0.978 | -0.714 | -- | 0.361 | 19.7 | 5.5 | 543 | -- | -- |
| 125.67 | 0.522 | 8.12 | 0.0585 | 1.6 | -1.22 | -- | -1.97 | 0.383 | 19.8 | 5.5 | 543 | -- | -- |
| 128.16 | 0.527 | 8.14 | 0.115 | 1.57 | -0.897 | -- | -- | 0.359 | 19.7 | 5.463 | 543 | -- | -- |
| 231.8 | 0.709 | 8.09 | 0.15 | -- | -0.957 | -- | -2.1 | 0.335 | -- | 8.2 | 1139 | -- | -- |
| 136.41 | 0.548 | 8.13 | 0.294 | 1.35 | -- | -0.355 | -- | 0.38 | 19.7 | -- | -- | -- | -- |
| 136.77 | 0.548 | 8.13 | 0.303 | 1.35 | -- | -- | -- | 0.379 | 19.7 | -- | -- | -- | -- |
| 231.93 | 0.709 | 8.11 | 0.184 | -- | -0.554 | -- | -- | 0.315 | -- | 8.053 | 1234 | -- | -- |
| 128.02 | 0.527 | 8.14 | -- | 1.61 | -0.843 | -- | -- | 0.361 | 19.7 | 4.9 | 540 | -- | -- |
| 234.57 | 0.716 | 8.1 | 0.285 | -- | -- | -- | -- | 0.36 | -- | -- | -- | -- | -- |
| 139.18 | 0.552 | 8.14 | -- | 1.34 | -- | -- | -- | 0.345 | 19.7 | -- | -- | -- | -- |
| 232.74 | 0.711 | 8.12 | -- | -- | -0.66 | -- | -- | 0.291 | -- | 8.085 | 1244 | -- | -- |
| 236.72 | 0.718 | 8.11 | -- | -- | -- | -- | -- | 0.328 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.07 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 5 | 18 |
| 2 | 119.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 4 | 119.93 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 5 | 16 |
| 5 | 119.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 20 | 120.68 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 22 | 120.83 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 23 | 120.84 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 24 | 120.86 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 29 | 120.90 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 61 | 121.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 145 | 121.77 | temperature | 20 | 14400 | > th | dose independent | sin | 17 | NA |
| 184 | 121.96 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 7 |
| 186 | 121.98 | temperature | 20 | 14400 | < th | dose independent | sin | 17 | NA |
| 230 | 122.16 | temperature | 20 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 244 | 122.24 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 258 | 122.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 261 | 122.34 | temperature | 25 | 14400 | < th | dose dependent | rect. | 12 | 10 |
| 262 | 122.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 323 | 122.49 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 360 | 122.60 | temperature | 25 | 14400 | < th | dose dependent | sin | 20 | NA |
| 376 | 122.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 396 | 122.71 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 445 | 122.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 446 | 122.83 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 447 | 122.84 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 541 | 123.05 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 542 | 123.05 | temperature | 25 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 550 | 123.08 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 10 |
| 573 | 123.13 | temperature | 30 | 90 | < th | dose dependent | sin | 3 | NA |
| 587 | 123.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 712 | 123.39 | temperature | 25 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 725 | 123.41 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 732 | 123.43 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 849 | 123.63 | wind | 5 | 720 | > th | dose independent | rect. | 7 | 7 |
| 869 | 123.65 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 3 |
| 915 | 123.72 | wind | 5 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 951 | 123.75 | temperature | 25 | 14400 | < th | dose dependent | no | NA | NA |
| 1000 | 123.80 | temperature | 25 | 14400 | < th | dose dependent | rect. | 13 | 23 |