Os11g0613800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
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Os11g0613800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF594 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.03 | 0.37 | 2.83 | -0.51 | 0.0283 | 0.567 | 0.146 | -3.19 | 0.0893 | 7.68 | 30.68 | 4265 | -- | -- |
| 62.34 | 0.368 | 2.78 | -0.0381 | 0.0251 | 0.19 | 0.128 | -- | 0.0716 | 7.8 | 28.57 | 3121 | -- | -- |
| 62.09 | 0.367 | 2.83 | -0.502 | 0.0286 | 0.565 | -- | -3.19 | 0.0878 | 7.3 | 30.9 | 4263 | -- | -- |
| 62.38 | 0.368 | 2.78 | -0.0356 | 0.0275 | 0.196 | -- | -- | 0.06 | 7.84 | 27.31 | 3140 | -- | -- |
| 62.14 | 0.367 | 2.83 | -0.502 | -- | 0.567 | -- | -3.19 | 0.0888 | -- | 30.9 | 4263 | -- | -- |
| 63.66 | 0.374 | 2.78 | 0.0181 | 0.0263 | -- | 0.14 | -- | 0.0543 | 6.57 | -- | -- | -- | -- |
| 63.7 | 0.374 | 2.78 | 0.0199 | 0.0282 | -- | -- | -- | 0.0537 | 5.5 | -- | -- | -- | -- |
| 62.42 | 0.368 | 2.78 | -0.0352 | -- | 0.193 | -- | -- | 0.0611 | -- | 27.35 | 3121 | -- | -- |
| 62.41 | 0.368 | 2.78 | -- | 0.0267 | 0.189 | -- | -- | 0.0692 | 7.81 | 27.9 | 3143 | -- | -- |
| 63.74 | 0.373 | 2.78 | 0.0208 | -- | -- | -- | -- | 0.0544 | -- | -- | -- | -- | -- |
| 63.71 | 0.373 | 2.78 | -- | 0.0285 | -- | -- | -- | 0.0515 | 5.47 | -- | -- | -- | -- |
| 62.45 | 0.368 | 2.78 | -- | -- | 0.187 | -- | -- | 0.0703 | -- | 27.98 | 3121 | -- | -- |
| 63.75 | 0.373 | 2.78 | -- | -- | -- | -- | -- | 0.0521 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.36 | radiation | 1.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 3 | 60.24 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 5 | 60.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 8 | 60.24 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 12 | 60.24 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 21 | 60.24 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 22 | 60.24 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 23 | 60.24 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 32 | 60.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 35 | 60.59 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 36 | 60.62 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 38 | 60.83 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 39 | 60.92 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 40 | 60.99 | radiation | 40.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 78 | 61.12 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 79 | 61.18 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 81 | 61.23 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 84 | 61.32 | wind | 1.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 85 | 61.32 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 87 | 61.37 | wind | 1.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 89 | 61.38 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 91 | 61.42 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 92 | 61.44 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 96 | 61.52 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 97 | 61.52 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 3 |
| 129 | 61.64 | temperature | 30.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 130 | 61.64 | wind | 3.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 135 | 61.65 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 145 | 61.67 | radiation | 1.0 | 10 | < th | dose independent | rect. | 5 | 9 |
| 148 | 61.68 | temperature | 25.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 158 | 61.74 | humidity | 60.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 160 | 61.76 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 168 | 61.82 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 169 | 61.83 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 177 | 61.85 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 180 | 61.88 | humidity | 90.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 187 | 61.90 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 194 | 61.91 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 202 | 61.92 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 205 | 61.92 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 209 | 61.92 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 214 | 61.92 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 215 | 61.92 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 216 | 61.92 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 220 | 61.92 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 224 | 61.93 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 227 | 61.94 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 230 | 61.95 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 270 | 61.96 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 274 | 61.96 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 17 | 16 |
| 281 | 61.97 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 300 | 61.97 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 305 | 61.97 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 8 | NA |
| 327 | 61.99 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 358 | 62.03 | temperature | 30.0 | 4320 | > th | dose independent | sin | 9 | NA |
| 370 | 62.04 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 373 | 62.05 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 374 | 62.05 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 9 | 4 |
| 394 | 62.05 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 417 | 62.06 | temperature | 30.0 | 4320 | < th | dose independent | sin | 9 | NA |
| 421 | 62.06 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 422 | 62.06 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 1 | NA |
| 424 | 62.07 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 429 | 62.07 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 4 |
| 430 | 62.07 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 7 | 6 |
| 436 | 62.07 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 24 | 13 |
| 443 | 62.07 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 479 | 62.08 | temperature | 30.0 | 4320 | > th | dose dependent | no | NA | NA |
| 616 | 62.08 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 655 | 62.09 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 21 | NA |
| 732 | 62.10 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 787 | 62.13 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 813 | 62.14 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 848 | 62.14 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 886 | 62.16 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 893 | 62.16 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 919 | 62.17 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 943 | 62.17 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 946 | 62.17 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 9 | 4 |
| 1000 | 62.19 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |