Os11g0610700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os11g0610700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.51 | 0.317 | 9.44 | -0.384 | 0.125 | -0.321 | 0.999 | 0.154 | 0.0948 | 16.8 | 1006 | 34 | -- | -- |
| 45.65 | 0.315 | 9.44 | -0.386 | 0.122 | -0.318 | 0.992 | -- | 0.0892 | 16.8 | 1006 | 35 | -- | -- |
| 47.97 | 0.323 | 9.43 | -0.381 | 0.13 | -0.344 | -- | 0.135 | 0.111 | 15.7 | 1006 | 32 | -- | -- |
| 48.08 | 0.323 | 9.43 | -0.382 | 0.127 | -0.341 | -- | -- | 0.106 | 15.6 | 1006 | 32 | -- | -- |
| 48.88 | 0.326 | 9.43 | -0.387 | -- | -0.356 | -- | 0.105 | 0.112 | -- | 1006 | 29 | -- | -- |
| 54.09 | 0.345 | 9.48 | -0.372 | 0.18 | -- | 1.24 | -- | -0.0691 | 17 | -- | -- | -- | -- |
| 57.95 | 0.356 | 9.47 | -0.369 | 0.188 | -- | -- | -- | -0.0629 | 16.5 | -- | -- | -- | -- |
| 48.95 | 0.326 | 9.43 | -0.388 | -- | -0.354 | -- | -- | 0.108 | -- | 1006 | 29 | -- | -- |
| 51.92 | 0.336 | 9.42 | -- | 0.134 | -0.338 | -- | -- | 0.146 | 15.6 | 1006 | 32 | -- | -- |
| 59.84 | 0.361 | 9.47 | -0.376 | -- | -- | -- | -- | -0.0678 | -- | -- | -- | -- | -- |
| 61.54 | 0.367 | 9.46 | -- | 0.195 | -- | -- | -- | -0.0218 | 16.4 | -- | -- | -- | -- |
| 52.91 | 0.339 | 9.42 | -- | -- | -0.35 | -- | -- | 0.149 | -- | 1006 | 29 | -- | -- |
| 63.58 | 0.372 | 9.46 | -- | -- | -- | -- | -- | -0.0261 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 2 | 43.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 3 | 43.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 4 | 43.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 5 | 43.82 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 6 | 43.87 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 7 | 43.99 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 11 | 18 |
| 9 | 44.16 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 19 |
| 14 | 44.34 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 24 | 44.72 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 28 | 44.86 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 33 | 44.93 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 19 |
| 35 | 44.96 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 38 | 44.97 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 48 | 45.13 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 56 | 45.20 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 69 | 45.26 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 71 | 45.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 72 | 45.29 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 74 | 45.30 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 80 | 45.34 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 92 | 45.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 96 | 45.38 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 10 |
| 111 | 45.43 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 116 | 45.44 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 117 | 45.44 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 125 | 45.47 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 126 | 45.47 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 21 |
| 127 | 45.48 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 149 | 45.51 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 155 | 45.53 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 173 | 45.55 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 8 |
| 175 | 45.56 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 21 | NA |
| 209 | 45.60 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 223 | 45.62 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 242 | 45.64 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 243 | 45.64 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 252 | 45.64 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 328 | 45.75 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 400 | 45.87 | temperature | 20.0 | 270 | > th | dose dependent | no | NA | NA |
| 454 | 45.98 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 474 | 46.03 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 495 | 46.08 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 506 | 46.09 | temperature | 20.0 | 10 | > th | dose dependent | sin | 18 | NA |
| 509 | 46.10 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 516 | 46.10 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 523 | 46.12 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 546 | 46.16 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 548 | 46.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 573 | 46.19 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 15 | 19 |
| 576 | 46.19 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 11 | 11 |
| 581 | 46.20 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 589 | 46.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 622 | 46.27 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 626 | 46.27 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 628 | 46.28 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 698 | 46.38 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 17 | 18 |
| 699 | 46.38 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 704 | 46.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 19 |
| 705 | 46.38 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 707 | 46.39 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 709 | 46.39 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 725 | 46.41 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 22 |
| 732 | 46.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 753 | 46.44 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 9 |
| 812 | 46.50 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 21 |
| 826 | 46.51 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 828 | 46.52 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 866 | 46.54 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 884 | 46.56 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 923 | 46.59 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 933 | 46.60 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 935 | 46.60 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 939 | 46.60 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 958 | 46.61 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 972 | 46.62 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 974 | 46.62 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 991 | 46.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 22 |