Os11g0609700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os11g0609700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.97 | 0.529 | 2.92 | -0.244 | 0.095 | -0.588 | -0.0446 | 1.47 | -0.0679 | 10.3 | 72 | 4420 | -- | -- |
| 129.42 | 0.53 | 2.92 | -0.142 | 0.102 | -0.469 | -0.0954 | -- | -0.0224 | 10.3 | 71.23 | 4424 | -- | -- |
| 126.97 | 0.525 | 2.92 | -0.246 | 0.095 | -0.589 | -- | 1.47 | -0.0683 | 10.4 | 71.98 | 4420 | -- | -- |
| 129.44 | 0.53 | 2.92 | -0.145 | 0.104 | -0.471 | -- | -- | -0.0224 | 10.7 | 71.2 | 4424 | -- | -- |
| 127.52 | 0.526 | 2.92 | -0.247 | -- | -0.6 | -- | 1.5 | -0.0685 | -- | 71.98 | 4423 | -- | -- |
| 132.46 | 0.54 | 2.9 | -0.144 | 0.114 | -- | -0.107 | -- | 0.0568 | 10.9 | -- | -- | -- | -- |
| 132.51 | 0.539 | 2.9 | -0.148 | 0.115 | -- | -- | -- | 0.0566 | 11 | -- | -- | -- | -- |
| 130.1 | 0.531 | 2.92 | -0.148 | -- | -0.482 | -- | -- | -0.0242 | -- | 71.27 | 4442 | -- | -- |
| 130.01 | 0.531 | 2.91 | -- | 0.104 | -0.468 | -- | -- | -0.00535 | 10.7 | 71.21 | 4440 | -- | -- |
| 133.33 | 0.54 | 2.9 | -0.15 | -- | -- | -- | -- | 0.0557 | -- | -- | -- | -- | -- |
| 133.09 | 0.54 | 2.89 | -- | 0.116 | -- | -- | -- | 0.0731 | 11.1 | -- | -- | -- | -- |
| 130.68 | 0.532 | 2.92 | -- | -- | -0.48 | -- | -- | -0.00872 | -- | 71 | 4442 | -- | -- |
| 133.93 | 0.54 | 2.9 | -- | -- | -- | -- | -- | 0.0724 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.45 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 13 | 1 |
| 7 | 118.26 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 9 | 118.71 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 23 | 118.92 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 26 | 118.97 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 37 | 118.97 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 50 | 119.85 | wind | 9 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 63 | 121.88 | wind | 9 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 64 | 121.99 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 1 |
| 65 | 121.99 | radiation | 1 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 71 | 122.89 | wind | 9 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 72 | 122.93 | humidity | 50 | 10 | > th | dose independent | sin | 8 | NA |
| 74 | 123.09 | atmosphere | 1010 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 81 | 123.10 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 118 | 123.41 | temperature | 30 | 30 | > th | dose independent | rect. | 13 | 1 |
| 203 | 123.90 | atmosphere | 1010 | 30 | > th | dose dependent | sin | 23 | NA |
| 459 | 124.29 | temperature | 30 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 477 | 124.35 | temperature | 30 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 497 | 124.50 | humidity | 80 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 521 | 124.68 | temperature | 30 | 10 | > th | dose dependent | rect. | 12 | 3 |
| 524 | 124.70 | humidity | 60 | 270 | < th | dose independent | rect. | 10 | 1 |
| 631 | 124.80 | humidity | 60 | 90 | < th | dose dependent | rect. | 11 | 3 |
| 639 | 124.82 | humidity | 60 | 270 | < th | dose independent | rect. | 9 | 5 |
| 648 | 124.94 | humidity | 70 | 4320 | > th | dose independent | sin | 11 | NA |
| 684 | 125.12 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 688 | 125.12 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 740 | 125.12 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 744 | 125.12 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 805 | 125.25 | radiation | 40 | 270 | > th | dose independent | rect. | 10 | 1 |
| 810 | 125.27 | humidity | 80 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 875 | 125.49 | humidity | 60 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 879 | 125.51 | humidity | 60 | 270 | < th | dose independent | sin | 7 | NA |
| 885 | 125.56 | humidity | 50 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 886 | 125.56 | humidity | 70 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 944 | 125.82 | humidity | 70 | 4320 | < th | dose independent | sin | 11 | NA |
| 968 | 125.99 | humidity | 60 | 10 | < th | dose dependent | rect. | 11 | 4 |
| 998 | 126.03 | humidity | 80 | 4320 | > th | dose independent | rect. | 5 | 1 |