Os11g0608300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os11g0608300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 715.38 | 1.26 | 5.37 | -4.52 | 0.58 | 2.31 | 1.68 | 10.5 | -0.95 | 8.23 | 1.287 | 7242 | -- | -- |
| 787.96 | 1.31 | 5.22 | -2.74 | 0.56 | 2.03 | 1.17 | -- | -0.684 | 8.52 | 16.03 | 4545 | -- | -- |
| 712.65 | 1.24 | 5.35 | -4.45 | 0.282 | 2.24 | -- | 10.6 | -0.924 | 7.43 | 1.301 | 8443 | -- | -- |
| 792.68 | 1.31 | 5.21 | -2.56 | 0.562 | 2.08 | -- | -- | -0.629 | 9.19 | 15.47 | 4571 | -- | -- |
| 715.33 | 1.25 | 5.35 | -4.49 | -- | 2.37 | -- | 11.2 | -0.915 | -- | 1.31 | 8420 | -- | -- |
| 867.1 | 1.38 | 5.28 | -2.56 | 0.523 | -- | 1.51 | -- | -0.922 | 8.6 | -- | -- | -- | -- |
| 874.1 | 1.38 | 5.28 | -2.51 | 0.534 | -- | -- | -- | -0.924 | 7.98 | -- | -- | -- | -- |
| 799.92 | 1.32 | 5.25 | -2.37 | -- | 2.16 | -- | -- | -0.62 | -- | 13.53 | 3779 | -- | -- |
| 943.62 | 1.43 | 5.21 | -- | 0.574 | 2.11 | -- | -- | -0.33 | 8.81 | 20.02 | 3059 | -- | -- |
| 889.69 | 1.39 | 5.3 | -2.51 | -- | -- | -- | -- | -0.917 | -- | -- | -- | -- | -- |
| 1040.77 | 1.51 | 5.22 | -- | 0.52 | -- | -- | -- | -0.644 | 8.32 | -- | -- | -- | -- |
| 927.4 | 1.42 | 5.21 | -- | -- | 2.49 | -- | -- | -0.378 | -- | 10.19 | 3820 | -- | -- |
| 1055.79 | 1.52 | 5.24 | -- | -- | -- | -- | -- | -0.639 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 694.82 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 2 | 694.90 | temperature | 30 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 3 | 694.93 | temperature | 10 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 7 | 695.83 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 8 | 695.84 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 12 | 697.06 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 23 | 697.96 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 30 | 698.39 | humidity | 90 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 33 | 698.56 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 36 | 698.82 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 45 | 699.27 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 12 |
| 53 | 699.62 | humidity | 90 | 43200 | > th | dose independent | rect. | 7 | 5 |
| 70 | 699.98 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 91 | 700.68 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 13 |
| 143 | 701.65 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 161 | 702.02 | temperature | 30 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 171 | 702.14 | temperature | 25 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 201 | 702.63 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 204 | 702.67 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 9 |
| 219 | 703.03 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 228 | 703.20 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 240 | 703.30 | humidity | 80 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 241 | 703.33 | humidity | 90 | 43200 | < th | dose independent | rect. | 15 | 5 |
| 271 | 703.59 | temperature | 25 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 278 | 703.63 | temperature | 25 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 281 | 703.69 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 293 | 703.84 | temperature | 25 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 295 | 703.85 | humidity | 80 | 14400 | > th | dose dependent | sin | 11 | NA |
| 309 | 703.96 | humidity | 70 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 314 | 704.02 | temperature | 25 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 369 | 704.59 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 414 | 705.08 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 416 | 705.08 | humidity | 70 | 43200 | > th | dose dependent | rect. | 15 | 13 |
| 420 | 705.14 | humidity | 90 | 43200 | < th | dose independent | sin | 22 | NA |
| 446 | 705.33 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 493 | 705.70 | humidity | 70 | 43200 | > th | dose dependent | sin | 14 | NA |
| 537 | 706.06 | temperature | 10 | 14400 | > th | dose dependent | sin | 7 | NA |
| 596 | 706.50 | humidity | 90 | 43200 | > th | dose dependent | rect. | 7 | 15 |
| 597 | 706.51 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 630 | 706.73 | temperature | 30 | 14400 | < th | dose dependent | sin | 7 | NA |
| 642 | 706.84 | humidity | 90 | 43200 | > th | dose independent | sin | 22 | NA |
| 711 | 707.23 | temperature | 25 | 43200 | < th | dose independent | sin | 20 | NA |
| 753 | 707.47 | humidity | 70 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 788 | 707.69 | temperature | 25 | 43200 | > th | dose independent | sin | 20 | NA |
| 836 | 707.96 | temperature | 30 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 898 | 708.28 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 941 | 708.54 | wind | 3 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 959 | 708.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 975 | 708.78 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 17 |
| 981 | 708.83 | temperature | 25 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 999 | 708.87 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 17 |