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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0608000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.41 (0.0238) R2 : 0.000424
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.022 (0.0501) R2dN8 : 0.000548 R2N8 : 0.000424
σ : 0.448
deviance : 92.01
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.5 0.437 3.38 0.156 0.354 0.332 -1.13 -1.38 0.0232 10.8 0.0004054 106 -- --
88.71 0.439 3.4 0.0883 0.432 0.405 0.377 -- 0.00869 11.5 0.00351 151 -- --
87.49 0.436 3.39 0.127 0.315 0.309 -- -0.549 0.0118 10.9 0.004132 144 -- --
89.2 0.44 3.39 0.128 0.314 0.305 -- -- 0.00634 10.9 0.02999 132 -- --
89.35 0.44 3.4 0.0671 -- 0.188 -- -0.606 -0.00603 -- 2.863 544 -- --
89.7 0.444 3.41 0.04 0.177 -- -0.469 -- -0.0235 4.25 -- -- -- --
90.23 0.445 3.4 0.0451 0.181 -- -- -- -0.0209 5.07 -- -- -- --
90.19 0.442 3.4 0.0505 -- 0.205 -- -- -0.00642 -- 12.33 593 -- --
89.25 0.44 3.39 -- 0.314 0.299 -- -- -0.00288 10.8 0.02617 128 -- --
91.94 0.448 3.4 0.0516 -- -- -- -- -0.0163 -- -- -- -- --
90.28 0.444 3.4 -- 0.182 -- -- -- -0.0259 5.06 -- -- -- --
90.25 0.442 3.4 -- -- 0.205 -- -- -0.013 -- 11.71 593 -- --
92.01 0.448 3.41 -- -- -- -- -- -0.022 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 82.21 temperature 25.0 90 > th dose dependent rect. 2 2
2 82.28 temperature 25.0 90 > th dose independent rect. 1 3
3 82.31 atmosphere 1000.0 30 > th dose independent rect. 3 23
6 82.46 radiation 1.0 43200 < th dose dependent rect. 3 1
7 82.55 atmosphere 1005.0 90 > th dose dependent rect. 2 1
8 82.56 atmosphere 1010.0 10 < th dose dependent rect. 2 1
9 82.76 atmosphere 1005.0 10 > th dose dependent rect. 2 3
21 83.11 temperature 25.0 90 > th dose independent rect. 2 1
25 83.13 humidity 90.0 10 > th dose independent rect. 2 1
30 83.14 wind 3.0 10 < th dose independent rect. 2 1
31 83.14 temperature 20.0 10 > th dose independent rect. 2 1
41 83.17 wind 9.0 1440 < th dose independent rect. 3 1
43 83.17 temperature 10.0 1440 > th dose independent rect. 3 1
46 83.17 temperature 30.0 1440 < th dose independent rect. 3 1
50 83.17 humidity 50.0 1440 > th dose independent rect. 3 1
59 83.17 atmosphere 995.0 1440 > th dose independent rect. 3 1
60 83.17 radiation 1.0 1440 < th dose independent rect. 3 1
80 83.17 temperature 10.0 1440 > th dose independent rect. 4 23
89 83.18 wind 3.0 10 < th dose dependent rect. 2 1
93 83.20 wind 1.0 30 > th dose independent rect. 2 1
103 83.24 atmosphere 1000.0 30 > th dose independent rect. 2 1
105 83.24 humidity 70.0 30 > th dose dependent rect. 2 1
107 83.25 humidity 50.0 30 > th dose dependent rect. 2 1
110 83.26 temperature 10.0 30 > th dose independent rect. 2 1
112 83.26 temperature 30.0 30 < th dose independent rect. 2 1
113 83.26 humidity 50.0 30 > th dose independent rect. 2 1
118 83.26 atmosphere 1010.0 30 < th dose independent rect. 2 1
120 83.26 radiation 1.0 30 < th dose independent rect. 2 1
125 83.26 precipitation 0.1 30 < th dose independent rect. 2 1
126 83.26 temperature 10.0 30 > th dose independent rect. 3 23
127 83.26 radiation 1.0 30 < th dose dependent rect. 2 1
132 83.26 precipitation 0.1 30 < th dose dependent rect. 2 1
136 83.30 atmosphere 995.0 30 > th dose dependent rect. 2 1
143 83.36 precipitation 0.1 30 < th dose independent rect. 3 23
145 83.36 precipitation 0.1 30 < th dose dependent rect. 3 23
176 83.42 temperature 30.0 30 < th dose dependent rect. 2 1
186 83.53 wind 9.0 30 < th dose independent rect. 3 23
213 84.52 humidity 50.0 30 > th dose independent rect. 3 23
218 84.59 precipitation 0.1 720 < th dose independent rect. 15 8
219 84.59 precipitation 0.1 720 < th dose dependent rect. 15 8
228 84.83 atmosphere 1000.0 10 > th dose independent rect. 21 23
233 84.94 temperature 25.0 270 > th dose independent rect. 22 5
234 84.95 precipitation 0.1 720 < th dose independent rect. 11 16
237 84.95 precipitation 0.1 720 < th dose dependent rect. 11 16
240 85.01 radiation 1.0 1440 < th dose dependent rect. 21 1
246 85.08 atmosphere 1000.0 720 > th dose independent rect. 21 18
248 85.08 temperature 25.0 30 > th dose dependent rect. 20 4
249 85.11 temperature 25.0 720 > th dose dependent rect. 4 4
250 85.13 humidity 90.0 10 < th dose dependent rect. 20 1
254 85.15 humidity 90.0 90 < th dose independent rect. 1 4
263 85.23 atmosphere 995.0 720 > th dose independent rect. 23 16
268 85.26 humidity 80.0 14400 < th dose dependent rect. 3 6
271 85.28 humidity 90.0 10 < th dose independent rect. 20 1
280 85.38 humidity 90.0 270 < th dose independent rect. 1 1
281 85.39 temperature 20.0 10 > th dose independent rect. 20 1
282 85.39 humidity 90.0 10 > th dose independent rect. 24 3
283 85.39 wind 9.0 720 < th dose independent rect. 3 8
289 85.42 atmosphere 1015.0 30 < th dose dependent rect. 20 1
290 85.43 temperature 10.0 720 > th dose independent rect. 3 8
291 85.43 temperature 10.0 720 > th dose independent rect. 15 8
292 85.43 humidity 50.0 720 > th dose independent rect. 3 8
293 85.43 atmosphere 995.0 720 > th dose independent rect. 3 8
294 85.43 temperature 10.0 720 > th dose independent rect. 11 16
295 85.43 temperature 10.0 720 > th dose independent rect. 23 16
304 85.46 wind 5.0 10 < th dose independent rect. 20 1
307 85.46 temperature 10.0 10 > th dose dependent rect. 20 1
310 85.47 wind 9.0 30 < th dose independent rect. 21 23
311 85.47 wind 7.0 30 < th dose dependent rect. 20 1
313 85.48 wind 1.0 30 > th dose independent rect. 20 1
317 85.48 temperature 10.0 30 > th dose independent rect. 20 1
319 85.48 temperature 30.0 30 < th dose independent rect. 20 1
320 85.48 humidity 70.0 14400 > th dose independent rect. 8 1
321 85.48 humidity 50.0 30 > th dose independent rect. 20 1
324 85.48 atmosphere 995.0 30 > th dose independent rect. 20 1
325 85.48 atmosphere 1010.0 30 < th dose independent rect. 20 1
327 85.48 radiation 1.0 30 < th dose independent rect. 20 1
332 85.48 precipitation 0.1 30 < th dose independent rect. 20 1
333 85.48 temperature 10.0 30 > th dose independent rect. 21 23
336 85.48 radiation 1.0 30 < th dose dependent rect. 20 1
341 85.48 precipitation 0.1 30 < th dose dependent rect. 20 1
344 85.49 atmosphere 1005.0 10 > th dose independent rect. 20 1
346 85.49 temperature 30.0 30 < th dose dependent rect. 20 1
380 85.52 wind 1.0 14400 < th dose dependent rect. 6 1
382 85.52 atmosphere 995.0 30 > th dose dependent rect. 20 1
403 85.53 wind 1.0 30 > th dose dependent rect. 20 1
414 85.55 humidity 50.0 30 > th dose dependent rect. 20 1
420 85.57 temperature 25.0 720 > th dose independent rect. 4 5
426 85.58 atmosphere 1015.0 720 < th dose independent rect. 3 8
433 85.59 temperature 10.0 1440 > th dose independent rect. 21 1
436 85.59 temperature 30.0 1440 < th dose independent rect. 21 1
440 85.59 humidity 50.0 1440 > th dose independent rect. 21 1
446 85.59 atmosphere 995.0 1440 > th dose independent rect. 21 1
447 85.59 radiation 1.0 1440 < th dose independent rect. 21 1
467 85.59 temperature 10.0 1440 > th dose independent rect. 22 23
477 85.62 humidity 70.0 14400 > th dose independent rect. 4 5
479 85.62 humidity 70.0 14400 > th dose independent rect. 1 8
512 85.70 humidity 70.0 14400 < th dose independent rect. 8 1
516 85.72 temperature 25.0 270 > th dose independent rect. 19 8
522 85.76 wind 1.0 14400 < th dose independent rect. 6 1
523 85.76 humidity 90.0 720 < th dose independent rect. 1 3
524 85.76 radiation 10.0 10 < th dose independent rect. 3 23
527 85.77 wind 9.0 720 < th dose independent rect. 15 8
531 85.78 precipitation 0.1 30 < th dose independent rect. 21 23
534 85.78 precipitation 0.1 30 < th dose dependent rect. 21 23
540 85.81 temperature 20.0 30 > th dose dependent rect. 20 7
543 85.83 atmosphere 1000.0 720 > th dose independent rect. 13 2
546 85.83 temperature 20.0 30 > th dose dependent rect. 20 9
548 85.84 precipitation 0.1 720 < th dose independent rect. 3 8
551 85.84 precipitation 0.1 720 < th dose dependent rect. 3 8
574 85.99 atmosphere 1000.0 90 > th dose independent rect. 5 14
575 85.99 atmosphere 995.0 720 > th dose independent rect. 11 16
579 86.00 humidity 70.0 14400 < th dose independent rect. 21 12
583 86.00 temperature 25.0 30 > th dose dependent rect. 24 11
584 86.01 humidity 70.0 14400 < th dose independent rect. 6 3
596 86.02 temperature 25.0 720 > th dose dependent rect. 18 3
597 86.02 radiation 1.0 90 < th dose dependent rect. 19 22
598 86.03 temperature 25.0 720 < th dose independent rect. 21 4
602 86.05 temperature 25.0 30 > th dose independent rect. 20 4
606 86.06 atmosphere 995.0 720 > th dose independent rect. 15 8
614 86.10 atmosphere 1005.0 30 > th dose independent rect. 2 3
615 86.10 precipitation 0.1 720 < th dose independent rect. 23 16
616 86.10 temperature 10.0 90 > th dose dependent rect. 5 14
617 86.10 precipitation 0.1 720 < th dose dependent rect. 23 16
623 86.12 atmosphere 1000.0 720 > th dose independent rect. 5 10
655 86.17 wind 1.0 14400 > th dose independent rect. 6 1
656 86.17 temperature 25.0 720 > th dose dependent rect. 20 1
659 86.17 temperature 10.0 90 > th dose dependent rect. 3 22
660 86.18 atmosphere 1000.0 720 > th dose independent rect. 3 6
669 86.21 temperature 10.0 90 > th dose dependent rect. 3 8
671 86.21 temperature 10.0 90 > th dose dependent rect. 3 16
680 86.23 temperature 25.0 30 > th dose dependent rect. 14 21
683 86.24 temperature 10.0 10 > th dose dependent rect. 5 15
684 86.24 temperature 25.0 30 > th dose dependent rect. 16 19
687 86.25 temperature 30.0 720 < th dose independent rect. 18 9
689 86.25 atmosphere 1000.0 90 > th dose independent rect. 3 16
698 86.28 atmosphere 1000.0 90 > th dose independent rect. 14 11
705 86.30 atmosphere 1000.0 10 > th dose independent rect. 14 12
706 86.30 wind 9.0 720 < th dose dependent rect. 2 1
715 86.33 radiation 20.0 10 < th dose dependent rect. 3 23
720 86.35 atmosphere 1000.0 720 > th dose independent rect. 3 22
729 86.36 atmosphere 1005.0 90 < th dose dependent rect. 24 1
733 86.37 atmosphere 1000.0 720 > th dose independent rect. 21 20
738 86.38 temperature 30.0 30 < th dose independent rect. 3 23
740 86.38 atmosphere 1005.0 10 < th dose dependent rect. 24 2
742 86.38 temperature 10.0 90 > th dose dependent rect. 19 10
744 86.39 radiation 1.0 90 > th dose independent rect. 16 19
745 86.39 radiation 1.0 90 < th dose dependent rect. 1 23
748 86.40 radiation 1.0 90 < th dose independent rect. 19 22
763 86.41 radiation 40.0 10 < th dose dependent rect. 3 23
768 86.42 temperature 25.0 10 > th dose dependent rect. 6 5
771 86.43 atmosphere 1000.0 720 > th dose independent rect. 13 20
773 86.43 wind 1.0 14400 < th dose dependent rect. 4 4
775 86.44 wind 5.0 14400 < th dose independent rect. 11 1
787 86.45 temperature 25.0 30 > th dose independent rect. 24 11
791 86.45 temperature 10.0 10 > th dose dependent rect. 20 9
794 86.46 wind 1.0 720 > th dose independent rect. 15 8
795 86.46 atmosphere 1000.0 10 > th dose independent rect. 5 15
798 86.46 atmosphere 1000.0 30 > th dose dependent rect. 5 6
801 86.47 wind 9.0 4320 > th dose independent rect. 5 7
802 86.47 humidity 60.0 10 > th dose independent rect. 14 12
803 86.47 humidity 50.0 720 > th dose independent rect. 23 16
815 86.48 atmosphere 1005.0 90 < th dose dependent rect. 23 3
820 86.49 wind 7.0 720 < th dose independent rect. 17 10
821 86.49 humidity 50.0 30 > th dose independent rect. 21 23
838 86.51 humidity 90.0 4320 > th dose dependent rect. 2 2
843 86.51 radiation 1.0 90 < th dose dependent rect. 6 23
844 86.52 atmosphere 1000.0 10 > th dose independent rect. 16 10
845 86.52 wind 1.0 10 > th dose independent rect. 21 23
852 86.53 radiation 40.0 30 < th dose independent rect. 14 12
853 86.53 temperature 30.0 90 < th dose independent rect. 1 14
862 86.54 atmosphere 1005.0 720 > th dose independent rect. 23 1
865 86.54 humidity 90.0 4320 > th dose independent rect. 2 7
866 86.54 wind 9.0 4320 > th dose independent rect. 4 9
867 86.54 radiation 10.0 10 < th dose independent rect. 5 21
876 86.55 wind 7.0 4320 > th dose independent rect. 11 1
881 86.55 radiation 30.0 90 < th dose independent rect. 15 10
883 86.55 atmosphere 1000.0 720 > th dose independent rect. 3 14
891 86.56 temperature 30.0 270 < th dose independent rect. 9 12
896 86.56 temperature 15.0 90 > th dose dependent rect. 5 6
910 86.58 humidity 90.0 1440 > th dose independent rect. 2 1
912 86.58 humidity 90.0 4320 < th dose independent rect. 3 6
915 86.58 wind 9.0 4320 < th dose independent rect. 2 12
917 86.58 atmosphere 1000.0 720 > th dose independent rect. 18 15
920 86.59 temperature 25.0 720 > th dose independent rect. 8 1
925 86.59 atmosphere 995.0 10 > th dose dependent rect. 14 12
929 86.60 wind 9.0 720 < th dose independent rect. 15 6
936 86.61 wind 9.0 4320 < th dose independent rect. 5 7
938 86.61 radiation 1.0 90 > th dose independent rect. 14 21
939 86.61 atmosphere 995.0 720 > th dose dependent rect. 14 1
953 86.62 wind 9.0 720 < th dose independent rect. 15 14
959 86.63 wind 9.0 4320 > th dose independent sin 5 NA
963 86.63 wind 1.0 14400 < th dose independent rect. 4 4
967 86.63 atmosphere 1000.0 720 > th dose independent rect. 21 12
978 86.63 wind 7.0 4320 > th dose dependent rect. 4 9
979 86.63 wind 9.0 30 < th dose dependent rect. 3 23
999 86.65 wind 5.0 10 < th dose independent rect. 19 10