Os11g0606600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0606600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 290.78 | 0.801 | 3.71 | 1.7 | 0.547 | -0.772 | 0.0121 | -2.05 | 2.22 | 12.9 | 22.92 | 1765 | -- | -- |
| 299.79 | 0.806 | 3.76 | 1.16 | 0.518 | -0.904 | 0.0877 | -- | 2.11 | 11.7 | 24.6 | 1671 | -- | -- |
| 290.78 | 0.794 | 3.71 | 1.7 | 0.547 | -0.772 | -- | -2.06 | 2.22 | 12.9 | 22.92 | 1766 | -- | -- |
| 296.48 | 0.802 | 3.8 | 0.893 | 0.529 | -1 | -- | -- | 1.99 | 12.8 | 24.6 | 1622 | -- | -- |
| 309.4 | 0.819 | 3.72 | 1.69 | -- | -0.756 | -- | -2.07 | 2.22 | -- | 22.96 | 1753 | -- | -- |
| 327.62 | 0.849 | 3.72 | 1.26 | 0.533 | -- | 0.0385 | -- | 2.34 | 12.9 | -- | -- | -- | -- |
| 327.63 | 0.848 | 3.72 | 1.26 | 0.533 | -- | -- | -- | 2.34 | 12.9 | -- | -- | -- | -- |
| 305.5 | 0.818 | 3.8 | 1.06 | -- | -0.655 | -- | -- | 2.01 | -- | 24.7 | 1650 | -- | -- |
| 316.89 | 0.829 | 3.83 | -- | 0.461 | -1.13 | -- | -- | 1.9 | 12.2 | 24.4 | 1668 | -- | -- |
| 345.35 | 0.868 | 3.73 | 1.24 | -- | -- | -- | -- | 2.33 | -- | -- | -- | -- | -- |
| 369.48 | 0.899 | 3.75 | -- | 0.513 | -- | -- | -- | 2.2 | 12.8 | -- | -- | -- | -- |
| 332.91 | 0.85 | 3.85 | -- | -- | -1.25 | -- | -- | 1.8 | -- | 24.57 | 1652 | -- | -- |
| 385.93 | 0.917 | 3.76 | -- | -- | -- | -- | -- | 2.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 290.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 3 | 290.96 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 4 | 291.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 5 | 291.13 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 6 | 291.14 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 34 | 292.00 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 54 | 292.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 15 |
| 97 | 292.91 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 213 | 293.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 220 | 293.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 22 |
| 268 | 293.91 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 274 | 293.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 298 | 294.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 364 | 294.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 369 | 294.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 373 | 294.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 387 | 294.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 425 | 294.66 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 436 | 294.70 | temperature | 10 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 449 | 294.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 497 | 294.90 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 11 |
| 501 | 294.92 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 572 | 295.10 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 601 | 295.17 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 677 | 295.31 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 679 | 295.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 684 | 295.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 5 |
| 741 | 295.44 | temperature | 25 | 1440 | < th | dose independent | rect. | 12 | 17 |
| 775 | 295.51 | temperature | 25 | 1440 | < th | dose independent | rect. | 12 | 21 |
| 784 | 295.53 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 880 | 295.71 | temperature | 25 | 1440 | < th | dose independent | rect. | 2 | 19 |