Os11g0606200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NB-ARC domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0606200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : NB-ARC domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 232.46 | 0.716 | 6.24 | -1.95 | 2.99 | 2.71 | -0.638 | -0.971 | 1.53 | 20.8 | 20.09 | 710 | 3.9 | -- |
| 232.74 | 0.711 | 6.22 | -1.74 | 3.04 | 2.69 | -0.532 | -- | 1.58 | 21 | 20.18 | 667 | 3.4 | -- |
| 233.55 | 0.712 | 6.25 | -1.92 | 3.05 | 2.71 | -- | -0.857 | 1.53 | 20.8 | 20.1 | 670 | 3.65 | -- |
| 233.57 | 0.712 | 6.23 | -1.72 | 3.06 | 2.7 | -- | -- | 1.58 | 21 | 20.12 | 653 | 3.27 | -- |
| 476.67 | 1.02 | 6.07 | -1.16 | -- | 2.42 | -- | 1.85 | 1.83 | -- | 23.14 | 1728 | 5.67 | -- |
| 375.95 | 0.909 | 6.06 | -1.11 | 2.21 | -- | -0.695 | -- | 2.19 | 21.6 | -- | -- | -- | -- |
| 377.76 | 0.91 | 6.06 | -1.08 | 2.21 | -- | -- | -- | 2.2 | 21.6 | -- | -- | -- | -- |
| 344.06 | 0.864 | 6.01 | -1.35 | -- | 2.79 | -- | -- | 2.07 | -- | 8.694 | 265 | 9.77 | -- |
| 307.1 | 0.816 | 6.18 | -- | 3.11 | 2.41 | -- | -- | 1.83 | 20.9 | 19.98 | 593 | 3.11 | -- |
| 668.28 | 1.21 | 6 | -1.06 | -- | -- | -- | -- | 2.19 | -- | -- | -- | -- | -- |
| 408.7 | 0.946 | 6.03 | -- | 2.21 | -- | -- | -- | 2.32 | 21.6 | -- | -- | -- | -- |
| 389.93 | 0.92 | 6 | -- | -- | 2.64 | -- | -- | 2.21 | -- | 1.397 | 284 | 10.2 | -- |
| 698.19 | 1.23 | 5.97 | -- | -- | -- | -- | -- | 2.31 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 229.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 4 | 232.70 | temperature | 20 | 720 | > th | dose dependent | sin | 10 | NA |
| 58 | 248.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 16 |
| 61 | 248.44 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 72 | 249.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 97 | 250.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 148 | 253.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 14 |
| 156 | 253.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 10 |
| 272 | 254.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 23 |
| 278 | 255.05 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 280 | 255.06 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 297 | 255.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 300 | 255.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 335 | 255.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 604 | 257.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 620 | 258.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 623 | 258.16 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 653 | 258.35 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 667 | 258.45 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 8 |
| 946 | 259.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 961 | 259.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |