Os11g0605500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Acyl-CoA dehydrogenase, middle and N-terminal domain containing protein.
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Os11g0605500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Acyl-CoA dehydrogenase, middle and N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.32 | 0.509 | 10.2 | 1.06 | 1.18 | 1.75 | 0.589 | -0.461 | 0.904 | 20.5 | 22.87 | 46 | -- | -- |
| 117.91 | 0.506 | 10.2 | 1.06 | 1.18 | 1.76 | 0.223 | -- | 0.903 | 20.5 | 23.12 | 46 | -- | -- |
| 117.96 | 0.506 | 10.2 | 1.05 | 1.18 | 1.76 | -- | -0.155 | 0.903 | 20.5 | 23.18 | 46 | -- | -- |
| 118.07 | 0.506 | 10.2 | 1.05 | 1.18 | 1.76 | -- | -- | 0.903 | 20.5 | 23.2 | 46 | -- | -- |
| 159.31 | 0.588 | 10.2 | 0.928 | -- | 2.13 | -- | -0.412 | 0.854 | -- | 17.34 | 15 | -- | -- |
| 169.57 | 0.61 | 10.3 | 0.989 | 2.54 | -- | 0.289 | -- | 0.789 | 22.8 | -- | -- | -- | -- |
| 169.92 | 0.61 | 10.3 | 0.977 | 2.54 | -- | -- | -- | 0.789 | 22.8 | -- | -- | -- | -- |
| 156.2 | 0.582 | 10.2 | 0.989 | -- | 2.14 | -- | -- | 0.828 | -- | 14.07 | 10 | -- | -- |
| 146.86 | 0.564 | 10.2 | -- | 1.2 | 1.68 | -- | -- | 0.79 | 20.7 | 22.84 | 44 | -- | -- |
| 569.08 | 1.11 | 10.2 | 1.03 | -- | -- | -- | -- | 0.804 | -- | -- | -- | -- | -- |
| 195.08 | 0.653 | 10.3 | -- | 2.55 | -- | -- | -- | 0.68 | 22.8 | -- | -- | -- | -- |
| 181.93 | 0.628 | 10.2 | -- | -- | 2.13 | -- | -- | 0.705 | -- | 13.18 | 8 | -- | -- |
| 596.97 | 1.14 | 10.2 | -- | -- | -- | -- | -- | 0.69 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.60 | humidity | 70 | 10 | > th | dose dependent | sin | 0 | NA |
| 4 | 115.46 | radiation | 10 | 90 | < th | dose dependent | sin | 0 | NA |
| 12 | 117.18 | humidity | 80 | 10 | > th | dose independent | sin | 0 | NA |
| 14 | 117.34 | radiation | 10 | 90 | > th | dose independent | sin | 0 | NA |
| 15 | 117.43 | humidity | 70 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 18 | 117.64 | radiation | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 22 | 118.25 | humidity | 80 | 10 | < th | dose independent | rect. | 7 | 9 |
| 25 | 118.43 | humidity | 80 | 10 | < th | dose independent | sin | 0 | NA |
| 41 | 119.84 | radiation | 20 | 30 | < th | dose dependent | no | NA | NA |
| 46 | 119.95 | radiation | 20 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 72 | 120.75 | radiation | 20 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 73 | 120.81 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 23 |
| 98 | 121.77 | radiation | 10 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 123 | 122.19 | humidity | 80 | 10 | > th | dose independent | rect. | 2 | 18 |
| 128 | 122.32 | radiation | 10 | 90 | > th | dose independent | rect. | 6 | 11 |
| 158 | 122.44 | radiation | 10 | 90 | > th | dose independent | no | NA | NA |
| 237 | 122.52 | radiation | 1 | 90 | < th | dose independent | rect. | 5 | 14 |
| 306 | 123.72 | humidity | 80 | 10 | > th | dose independent | rect. | 6 | 14 |
| 361 | 124.81 | radiation | 1 | 30 | < th | dose independent | sin | 23 | NA |
| 389 | 125.22 | humidity | 60 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 415 | 125.53 | radiation | 20 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 416 | 125.54 | radiation | 20 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 477 | 126.40 | radiation | 20 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 520 | 126.94 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 521 | 126.97 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 551 | 127.46 | radiation | 10 | 10 | > th | dose independent | rect. | 17 | 23 |
| 564 | 127.59 | radiation | 10 | 10 | > th | dose independent | rect. | 9 | 23 |
| 799 | 128.23 | humidity | 90 | 10 | < th | dose dependent | sin | 1 | NA |
| 994 | 129.50 | radiation | 20 | 90 | < th | dose dependent | rect. | 2 | 18 |