Os11g0605300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0605300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.68 | 0.485 | 7.63 | -0.661 | 0.466 | 1.18 | -0.123 | -4.5 | -3.37 | 7.11 | 25.5 | 82 | -- | -- |
| 113.39 | 0.5 | 7.58 | -0.192 | 0.378 | 0.797 | -0.00599 | -- | -3.32 | 7.21 | 22.55 | 87 | -- | -- |
| 106.71 | 0.481 | 7.62 | -0.658 | 0.462 | 1.19 | -- | -4.52 | -3.36 | 7.08 | 25.58 | 78 | -- | -- |
| 112.5 | 0.497 | 7.59 | -0.24 | 0.352 | 0.989 | -- | -- | -3.34 | 7.12 | 16.26 | 99 | -- | -- |
| 115.3 | 0.5 | 7.62 | -0.566 | -- | 1.1 | -- | -4.79 | -3.31 | -- | 26.4 | 26 | -- | -- |
| 122.7 | 0.519 | 7.55 | -0.0179 | 0.388 | -- | -0.461 | -- | -3.19 | 10.6 | -- | -- | -- | -- |
| 123.56 | 0.521 | 7.55 | -0.0371 | 0.392 | -- | -- | -- | -3.19 | 10.4 | -- | -- | -- | -- |
| 118.83 | 0.51 | 7.59 | -0.222 | -- | 0.988 | -- | -- | -3.33 | -- | 14.06 | 41 | -- | -- |
| 113.88 | 0.5 | 7.58 | -- | 0.342 | 0.89 | -- | -- | -3.3 | 7.51 | 16.12 | 99 | -- | -- |
| 132.94 | 0.539 | 7.56 | -0.0434 | -- | -- | -- | -- | -3.19 | -- | -- | -- | -- | -- |
| 123.59 | 0.52 | 7.55 | -- | 0.392 | -- | -- | -- | -3.19 | 10.4 | -- | -- | -- | -- |
| 119.94 | 0.51 | 7.59 | -- | -- | 0.924 | -- | -- | -3.29 | -- | 11.6 | 2 | -- | -- |
| 132.99 | 0.538 | 7.56 | -- | -- | -- | -- | -- | -3.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.08 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 10 |
| 3 | 104.27 | temperature | 25 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 4 | 104.35 | temperature | 25 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 5 | 104.51 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 17 |
| 8 | 104.83 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 21 |
| 9 | 104.85 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 19 |
| 13 | 104.96 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 24 | 105.32 | temperature | 25 | 90 | > th | dose dependent | rect. | 21 | 20 |
| 31 | 105.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 37 | 105.55 | temperature | 25 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 59 | 105.81 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 68 | 105.91 | temperature | 25 | 90 | > th | dose independent | rect. | 24 | 7 |
| 74 | 106.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 77 | 106.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 84 | 106.11 | temperature | 25 | 90 | > th | dose dependent | sin | 1 | NA |
| 109 | 106.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 150 | 106.83 | temperature | 15 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 152 | 106.85 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 158 | 106.90 | temperature | 25 | 1440 | > th | dose independent | rect. | 24 | 6 |
| 170 | 106.99 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 1 |
| 193 | 107.07 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 217 | 107.21 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 231 | 107.27 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 236 | 107.30 | radiation | 10 | 90 | > th | dose independent | rect. | 12 | 23 |
| 242 | 107.34 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 245 | 107.34 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 10 |
| 260 | 107.38 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 12 |
| 263 | 107.39 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 8 |
| 270 | 107.40 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 271 | 107.40 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 8 |
| 282 | 107.41 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 6 |
| 310 | 107.44 | temperature | 25 | 4320 | < th | dose dependent | sin | 9 | NA |
| 346 | 107.47 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 17 |
| 397 | 107.51 | temperature | 10 | 4320 | > th | dose dependent | sin | 8 | NA |
| 474 | 107.57 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 577 | 107.63 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 18 |
| 612 | 107.66 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 4 |
| 692 | 107.71 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 716 | 107.72 | temperature | 25 | 10 | > th | dose independent | rect. | 24 | 7 |
| 816 | 107.78 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 4 |
| 817 | 107.78 | radiation | 10 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 850 | 107.80 | temperature | 25 | 90 | > th | dose independent | rect. | 7 | 10 |
| 923 | 107.84 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 940 | 107.85 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 2 |