Os11g0604500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0604500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.24 | 0.504 | 6.71 | 1.29 | 1.1 | 1.53 | -1.18 | -1.66 | 0.389 | 0.243 | 7.339 | 7012 | -- | -- |
| 117.59 | 0.505 | 6.66 | 1.63 | 1.11 | 1.66 | -1.28 | -- | 0.471 | 0.211 | 8.617 | 7051 | -- | -- |
| 121.18 | 0.513 | 6.71 | 1.32 | 1.1 | 1.51 | -- | -1.82 | 0.393 | 0.24 | 4.609 | 6943 | -- | -- |
| 123.97 | 0.519 | 6.64 | 1.7 | 1.09 | 1.63 | -- | -- | 0.496 | 0.212 | 3.026 | 6999 | -- | -- |
| 194.99 | 0.65 | 6.69 | 1.32 | -- | 1.76 | -- | -1.47 | 0.388 | -- | 10.3 | 6761 | -- | -- |
| 163.18 | 0.599 | 6.55 | 2.48 | 1.16 | -- | -1.16 | -- | 0.912 | 0.36 | -- | -- | -- | -- |
| 168.93 | 0.609 | 6.55 | 2.52 | 1.17 | -- | -- | -- | 0.918 | 0.339 | -- | -- | -- | -- |
| 195.43 | 0.651 | 6.61 | 1.77 | -- | 1.82 | -- | -- | 0.584 | -- | 9.63 | 3807 | -- | -- |
| 146.16 | 0.563 | 6.76 | -- | 1.12 | 2.22 | -- | -- | -0.0264 | 0.308 | -0.314 | 47520 | -- | -- |
| 254.73 | 0.746 | 6.53 | 2.56 | -- | -- | -- | -- | 0.937 | -- | -- | -- | -- | -- |
| 336.72 | 0.858 | 6.61 | -- | 1.2 | -- | -- | -- | 0.637 | 0.448 | -- | -- | -- | -- |
| 220.96 | 0.692 | 6.74 | -- | -- | 2.38 | -- | -- | -0.0329 | -- | -102.3 | 41281 | -- | -- |
| 427.91 | 0.966 | 6.59 | -- | -- | -- | -- | -- | 0.652 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 5 | 115.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 15 | 115.52 | temperature | 10 | 720 | > th | dose dependent | sin | 11 | NA |
| 17 | 115.65 | temperature | 30 | 720 | < th | dose dependent | sin | 12 | NA |
| 34 | 116.42 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 37 | 116.60 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 60 | 117.40 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 63 | 117.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 67 | 117.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 4 |
| 69 | 117.53 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 73 | 117.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 4 |
| 89 | 117.79 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 103 | 117.93 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 107 | 117.96 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 154 | 118.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 171 | 118.22 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 14 |
| 187 | 118.29 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 13 |
| 210 | 118.34 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 10 |
| 215 | 118.36 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 279 | 118.46 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 280 | 118.47 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 288 | 118.48 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 300 | 118.51 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 336 | 118.54 | temperature | 10 | 4320 | > th | dose dependent | sin | 11 | NA |
| 382 | 118.61 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 395 | 118.63 | temperature | 30 | 4320 | < th | dose dependent | sin | 11 | NA |
| 407 | 118.65 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 410 | 118.65 | humidity | 60 | 43200 | < th | dose dependent | rect. | 21 | 14 |
| 482 | 118.74 | radiation | 1 | 14400 | > th | dose independent | sin | 9 | NA |
| 778 | 119.08 | radiation | 1 | 14400 | < th | dose independent | sin | 8 | NA |
| 844 | 119.15 | humidity | 70 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 872 | 119.18 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 15 |