Os11g0603100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0603100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 222.28 | 0.7 | 3.85 | 0.421 | 0.159 | 3.75 | -3.72 | -2.01 | -0.568 | 19.8 | 29.36 | 266 | 0.0214 | 10.1 |
| 224.77 | 0.698 | 3.89 | 0.282 | 0.444 | 3.91 | -2.57 | -- | -0.615 | 19.9 | 30.26 | 241 | 0.45 | 10.1 |
| 231.06 | 0.708 | 3.88 | 0.285 | 0.0306 | 3.56 | -- | 1.53 | -0.627 | 20.5 | 29.36 | 249 | 0.134 | 10.5 |
| 236.32 | 0.716 | 3.87 | 0.368 | 0.155 | 3.55 | -- | -- | -0.602 | 17.8 | 29.44 | 232 | 0.267 | 10.2 |
| 230.83 | 0.708 | 3.88 | 0.264 | -- | 3.55 | -- | 1.58 | -0.628 | -- | 29.26 | 248 | 0.264 | 10.4 |
| 354.02 | 0.882 | 3.89 | -0.0436 | 2.03 | -- | 1.49 | -- | -0.968 | 7.26 | -- | -- | -- | -- |
| 359.95 | 0.888 | 3.9 | -0.0125 | 2.03 | -- | -- | -- | -0.972 | 7.23 | -- | -- | -- | -- |
| 236.09 | 0.716 | 3.87 | 0.372 | -- | 3.49 | -- | -- | -0.606 | -- | 29.16 | 232 | 0.4 | 10.1 |
| 239.15 | 0.72 | 3.89 | -- | 0.148 | 3.5 | -- | -- | -0.675 | 17.1 | 29.78 | 223 | 0.483 | 10.1 |
| 578.76 | 1.12 | 3.94 | 0.0239 | -- | -- | -- | -- | -0.937 | -- | -- | -- | -- | -- |
| 359.96 | 0.887 | 3.9 | -- | 2.03 | -- | -- | -- | -0.97 | 7.23 | -- | -- | -- | -- |
| 239.03 | 0.72 | 3.88 | -- | -- | 3.41 | -- | -- | -0.665 | -- | 29.47 | 208 | 0.789 | 9.87 |
| 578.78 | 1.12 | 3.94 | -- | -- | -- | -- | -- | -0.939 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 223.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 10 |
| 12 | 240.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 15 | 240.75 | temperature | 25 | 30 | < th | dose independent | rect. | 3 | 9 |
| 36 | 248.33 | temperature | 20 | 90 | > th | dose dependent | sin | 5 | NA |
| 37 | 248.38 | temperature | 25 | 270 | < th | dose independent | rect. | 24 | 10 |
| 59 | 250.93 | temperature | 30 | 90 | < th | dose dependent | sin | 5 | NA |
| 113 | 257.20 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 191 | 262.43 | temperature | 25 | 90 | < th | dose independent | sin | 5 | NA |
| 263 | 267.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 7 |
| 274 | 267.69 | temperature | 25 | 30 | > th | dose independent | sin | 4 | NA |
| 280 | 268.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 453 | 274.44 | temperature | 25 | 270 | > th | dose independent | rect. | 24 | 10 |
| 480 | 275.08 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 10 |
| 496 | 275.55 | temperature | 25 | 90 | > th | dose independent | rect. | 1 | 12 |
| 499 | 275.70 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 556 | 277.20 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 8 |
| 589 | 278.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 13 |
| 648 | 279.84 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 11 |
| 649 | 279.88 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 742 | 281.83 | temperature | 25 | 30 | > th | dose independent | rect. | 6 | 8 |
| 830 | 283.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 984 | 286.43 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 21 |