Os11g0602700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os11g0602700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.06 | 0.418 | 7.66 | 1.18 | 0.683 | -1.75 | -0.231 | 1.06 | 0.179 | 4.21 | 10.17 | 3679 | -- | -- |
| 80.08 | 0.417 | 7.69 | 0.933 | 0.673 | -1.79 | -0.187 | -- | 0.113 | 4.17 | 12.4 | 3680 | -- | -- |
| 79.21 | 0.415 | 7.66 | 1.17 | 0.682 | -1.75 | -- | 1.03 | 0.179 | 4.2 | 10.24 | 3677 | -- | -- |
| 80.14 | 0.417 | 7.69 | 0.941 | 0.683 | -1.79 | -- | -- | 0.125 | 4.18 | 10.31 | 3684 | -- | -- |
| 95.71 | 0.458 | 7.7 | 0.683 | -- | -2.04 | -- | 0.775 | 0.0896 | -- | 10.19 | 3413 | -- | -- |
| 134.51 | 0.544 | 7.77 | 0.184 | 0.633 | -- | -0.213 | -- | -0.227 | 4.94 | -- | -- | -- | -- |
| 134.63 | 0.543 | 7.77 | 0.184 | 0.632 | -- | -- | -- | -0.226 | 4.93 | -- | -- | -- | -- |
| 96.22 | 0.459 | 7.72 | 0.577 | -- | -2.03 | -- | -- | 0.0602 | -- | 10.19 | 3413 | -- | -- |
| 95.12 | 0.454 | 7.73 | -- | 0.651 | -1.35 | -- | -- | -0.0365 | 4.11 | 14.1 | 2211 | -- | -- |
| 155.63 | 0.583 | 7.78 | 0.208 | -- | -- | -- | -- | -0.21 | -- | -- | -- | -- | -- |
| 135.52 | 0.545 | 7.77 | -- | 0.635 | -- | -- | -- | -0.247 | 4.92 | -- | -- | -- | -- |
| 104.49 | 0.478 | 7.73 | -- | -- | -1.78 | -- | -- | -0.0241 | -- | 15.19 | 1903 | -- | -- |
| 156.77 | 0.584 | 7.78 | -- | -- | -- | -- | -- | -0.233 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.39 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 3 | 75.92 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 4 | 75.92 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 13 | 76.85 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 8 |
| 30 | 77.05 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 8 |
| 40 | 77.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 81 | 77.48 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 115 | 77.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 176 | 78.22 | temperature | 30 | 4320 | < th | dose dependent | sin | 14 | NA |
| 186 | 78.27 | temperature | 10 | 4320 | > th | dose dependent | sin | 14 | NA |
| 214 | 78.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 288 | 78.68 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 315 | 78.80 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 338 | 78.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 503 | 79.23 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 908 | 79.86 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |