Os11g0602200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to SET domain protein SDG111.
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Os11g0602200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to SET domain protein SDG111.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.1 | 0.183 | 12.1 | 1.22 | 0.556 | 0.216 | 0.249 | -0.92 | 0.399 | 18.4 | 93 | 526 | -- | -- |
| 16.05 | 0.187 | 12.1 | 1.16 | 0.582 | 0.231 | 0.529 | -- | 0.394 | 18.4 | 91.82 | 528 | -- | -- |
| 15.17 | 0.181 | 12.1 | 1.23 | 0.555 | 0.219 | -- | -1.24 | 0.401 | 18.4 | 93.15 | 448 | -- | -- |
| 16.89 | 0.191 | 12.1 | 1.16 | 0.575 | 0.212 | -- | -- | 0.395 | 18.5 | 91.69 | 605 | -- | -- |
| 27.13 | 0.243 | 12.1 | 1.25 | -- | -0.316 | -- | -1.43 | 0.325 | -- | 92.51 | 386 | -- | -- |
| 16.84 | 0.192 | 12.1 | 1.17 | 0.515 | -- | 0.521 | -- | 0.36 | 18.4 | -- | -- | -- | -- |
| 17.51 | 0.196 | 12.1 | 1.17 | 0.518 | -- | -- | -- | 0.362 | 18.3 | -- | -- | -- | -- |
| 25.78 | 0.236 | 12.1 | 1.22 | -- | -0.41 | -- | -- | 0.285 | -- | 78.22 | 360 | -- | -- |
| 50.51 | 0.331 | 12.1 | -- | 0.554 | 0.465 | -- | -- | 0.344 | 18.8 | 85.78 | 2328 | -- | -- |
| 31.43 | 0.262 | 12.1 | 1.15 | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
| 53.46 | 0.342 | 12.2 | -- | 0.502 | -- | -- | -- | 0.232 | 18.4 | -- | -- | -- | -- |
| 58.9 | 0.357 | 12.1 | -- | -- | -0.531 | -- | -- | 0.214 | -- | 42 | 465 | -- | -- |
| 66.57 | 0.381 | 12.1 | -- | -- | -- | -- | -- | 0.222 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.91 | wind | 5 | 1440 | < th | dose dependent | rect. | 1 | 6 |
| 5 | 14.98 | wind | 1 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 44 | 15.15 | wind | 3 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 54 | 15.18 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 60 | 15.20 | wind | 3 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 88 | 15.27 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 96 | 15.29 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 104 | 15.30 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 6 |
| 137 | 15.35 | humidity | 90 | 720 | > th | dose dependent | rect. | 4 | 22 |
| 155 | 15.38 | wind | 3 | 1440 | < th | dose independent | rect. | 23 | 10 |
| 159 | 15.38 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 18 |
| 177 | 15.40 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 192 | 15.41 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 10 |
| 198 | 15.42 | humidity | 90 | 720 | > th | dose dependent | sin | 14 | NA |
| 232 | 15.44 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 22 |
| 234 | 15.45 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 260 | 15.47 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 262 | 15.47 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 267 | 15.47 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 275 | 15.48 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 16 |
| 305 | 15.50 | wind | 9 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 318 | 15.51 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 319 | 15.51 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 321 | 15.51 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 24 | 7 |
| 347 | 15.52 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 370 | 15.53 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 372 | 15.53 | wind | 5 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 373 | 15.53 | wind | 9 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 393 | 15.53 | humidity | 90 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 397 | 15.54 | humidity | 90 | 720 | > th | dose dependent | no | NA | NA |
| 408 | 15.54 | humidity | 90 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 475 | 15.57 | humidity | 80 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 487 | 15.58 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 495 | 15.58 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 3 | 6 |
| 501 | 15.58 | humidity | 90 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 521 | 15.58 | humidity | 90 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 547 | 15.60 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 3 | 2 |
| 554 | 15.60 | wind | 3 | 1440 | < th | dose dependent | sin | 8 | NA |
| 555 | 15.60 | humidity | 90 | 4320 | > th | dose dependent | rect. | 1 | 2 |
| 567 | 15.61 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 579 | 15.61 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 604 | 15.62 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 612 | 15.63 | wind | 5 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 616 | 15.63 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 619 | 15.63 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 620 | 15.63 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 665 | 15.65 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 679 | 15.65 | humidity | 90 | 720 | > th | dose independent | rect. | 9 | 17 |
| 700 | 15.66 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 704 | 15.66 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 706 | 15.66 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 711 | 15.66 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 713 | 15.66 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 783 | 15.69 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 784 | 15.69 | humidity | 90 | 720 | > th | dose independent | rect. | 23 | 1 |
| 785 | 15.69 | radiation | 20 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 801 | 15.69 | humidity | 90 | 720 | > th | dose dependent | rect. | 1 | 1 |
| 819 | 15.69 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 826 | 15.70 | wind | 9 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 827 | 15.70 | wind | 5 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 828 | 15.70 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 854 | 15.70 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 872 | 15.71 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 892 | 15.71 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 894 | 15.71 | humidity | 90 | 720 | > th | dose independent | rect. | 5 | 21 |
| 934 | 15.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 944 | 15.72 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 11 | 16 |
| 955 | 15.73 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 963 | 15.73 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 3 | 8 |
| 975 | 15.73 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 2 |