Os11g0601600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os11g0601600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.47 | 0.559 | 2.94 | 0.124 | 0.148 | 0.523 | 0.238 | 0.943 | -0.0355 | 9.39 | 1013 | 9675 | -- | -- |
| 144.32 | 0.56 | 2.9 | 0.392 | 0.154 | 0.446 | 0.225 | -- | 0.0298 | 9.29 | 1011 | 9825 | -- | -- |
| 141.63 | 0.554 | 2.94 | 0.138 | 0.149 | 0.524 | -- | 0.926 | -0.035 | 9.09 | 1012 | 9634 | -- | -- |
| 144.49 | 0.56 | 2.9 | 0.412 | 0.153 | 0.451 | -- | -- | 0.0327 | 9.06 | 1012 | 9791 | -- | -- |
| 142.92 | 0.557 | 2.94 | 0.132 | -- | 0.526 | -- | 0.943 | -0.0349 | -- | 1013 | 9630 | -- | -- |
| 152.57 | 0.579 | 2.93 | 0.188 | 0.15 | -- | 0.271 | -- | -0.0911 | 9.88 | -- | -- | -- | -- |
| 152.83 | 0.579 | 2.93 | 0.198 | 0.153 | -- | -- | -- | -0.0912 | 9.27 | -- | -- | -- | -- |
| 145.83 | 0.562 | 2.9 | 0.413 | -- | 0.451 | -- | -- | 0.0356 | -- | 1012 | 9717 | -- | -- |
| 148.21 | 0.567 | 2.92 | -- | 0.165 | 0.352 | -- | -- | -0.0374 | 9.26 | 1009 | 10821 | -- | -- |
| 154.19 | 0.58 | 2.93 | 0.197 | -- | -- | -- | -- | -0.0906 | -- | -- | -- | -- | -- |
| 153.86 | 0.58 | 2.93 | -- | 0.153 | -- | -- | -- | -0.113 | 9.17 | -- | -- | -- | -- |
| 149.42 | 0.569 | 2.92 | -- | -- | 0.403 | -- | -- | -0.0131 | -- | 1009 | 16520 | -- | -- |
| 155.21 | 0.582 | 2.94 | -- | -- | -- | -- | -- | -0.112 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.66 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 10 | 2 |
| 7 | 138.56 | wind | 7.0 | 90 | > th | dose independent | rect. | 21 | 1 |
| 9 | 138.58 | wind | 7.0 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 51 | 139.17 | radiation | 1.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 56 | 139.22 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 58 | 139.22 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 84 | 140.00 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 1 |
| 86 | 140.00 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 101 | 140.38 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 170 | 140.88 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 175 | 140.91 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 178 | 140.91 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 185 | 141.01 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 188 | 141.01 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 189 | 141.03 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 210 | 141.27 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 3 |
| 213 | 141.37 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 214 | 141.37 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 19 | 3 |
| 219 | 141.42 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 3 |
| 253 | 141.64 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 255 | 141.66 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 261 | 141.69 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 269 | 141.70 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 272 | 141.70 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 281 | 141.76 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 306 | 141.87 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 3 | 2 |
| 313 | 141.89 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 334 | 141.98 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 355 | 142.04 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 357 | 142.04 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 358 | 142.04 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 361 | 142.04 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 362 | 142.05 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 368 | 142.06 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 370 | 142.06 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 377 | 142.06 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 394 | 142.07 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 437 | 142.07 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 466 | 142.08 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 562 | 142.13 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 579 | 142.15 | atmosphere | 1015.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 588 | 142.15 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 594 | 142.16 | atmosphere | 1015.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 623 | 142.17 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 649 | 142.19 | atmosphere | 1015.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 700 | 142.22 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 8 | 1 |
| 713 | 142.22 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 772 | 142.24 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 16 |
| 829 | 142.26 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 19 | 7 |
| 834 | 142.26 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 14 |
| 875 | 142.27 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 4 |
| 978 | 142.30 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 21 | 1 |