Os11g0601500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os11g0601500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 207.47 | 0.677 | 3.1 | -0.47 | 0.293 | 0.572 | -0.45 | -1.4 | -0.0662 | 13 | 87.78 | 1237 | -- | -- |
| 210.22 | 0.675 | 3.12 | -0.357 | 0.304 | 0.549 | -0.292 | -- | -0.0574 | 12.8 | 87.87 | 1224 | -- | -- |
| 208.05 | 0.672 | 3.1 | -0.479 | 0.246 | 0.561 | -- | -1.33 | -0.0642 | 13 | 88 | 1356 | -- | -- |
| 210.49 | 0.676 | 3.12 | -0.365 | 0.305 | 0.513 | -- | -- | -0.0564 | 12.8 | 88.26 | 1191 | -- | -- |
| 210.11 | 0.675 | 3.11 | -0.524 | -- | 0.61 | -- | -1.68 | -0.0831 | -- | 88 | 1543 | -- | -- |
| 214.94 | 0.687 | 3.1 | -0.427 | 0.204 | -- | -0.286 | -- | 0.00299 | 12.5 | -- | -- | -- | -- |
| 215.3 | 0.687 | 3.1 | -0.438 | 0.205 | -- | -- | -- | 0.0016 | 12.5 | -- | -- | -- | -- |
| 213.63 | 0.681 | 3.12 | -0.369 | -- | 0.528 | -- | -- | -0.0581 | -- | 87.55 | 1534 | -- | -- |
| 213.91 | 0.681 | 3.11 | -- | 0.325 | 0.587 | -- | -- | -0.0257 | 12.8 | 88.27 | 1192 | -- | -- |
| 217.93 | 0.69 | 3.11 | -0.445 | -- | -- | -- | -- | -0.00184 | -- | -- | -- | -- | -- |
| 220.36 | 0.694 | 3.09 | -- | 0.211 | -- | -- | -- | 0.0504 | 12.6 | -- | -- | -- | -- |
| 217.09 | 0.686 | 3.11 | -- | -- | 0.618 | -- | -- | -0.0282 | -- | 87.76 | 1540 | -- | -- |
| 223.17 | 0.697 | 3.1 | -- | -- | -- | -- | -- | 0.0476 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 195.77 | temperature | 30 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 198.39 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 4 | 198.94 | humidity | 60 | 30 | < th | dose independent | rect. | 18 | 16 |
| 6 | 198.96 | humidity | 60 | 30 | < th | dose dependent | rect. | 18 | 16 |
| 9 | 198.99 | humidity | 60 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 12 | 199.05 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 42 | 199.05 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 76 | 199.06 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 143 | 199.09 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 6 |
| 169 | 199.13 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 251 | 199.20 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 3 |
| 253 | 199.20 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 286 | 199.22 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 319 | 199.31 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 11 |
| 323 | 199.32 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 363 | 199.42 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 413 | 199.77 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 11 |
| 420 | 199.78 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 9 |
| 424 | 199.79 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 426 | 199.84 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 7 |
| 530 | 201.02 | wind | 1 | 10 | < th | dose dependent | sin | 22 | NA |
| 603 | 201.23 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 609 | 201.36 | radiation | 40 | 30 | > th | dose independent | rect. | 9 | 1 |
| 660 | 201.72 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 668 | 201.89 | temperature | 30 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 710 | 202.25 | temperature | 30 | 90 | > th | dose independent | rect. | 10 | 1 |
| 763 | 202.44 | wind | 1 | 10 | > th | dose independent | sin | 21 | NA |
| 961 | 203.80 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 9 |
| 967 | 203.88 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 7 | 1 |