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Os11g0599200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.6 (0.0234) R2 : 0.614
β1 : 1.03 (0.0859) R2dD : 0.127 R2D : 0.126
β2 : 0.94 (0.0642) R2dC : 0.202 R2C : 0.0135
β3 : -1.11 (0.0491) R2dE : 0.481 R2E : 0.277
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0311 (0.0501) R2dN8 : 0.000436 R2N8 : 0.000625
σ : 0.438
deviance : 88.61
__
_____
C
peak time of C : 5.21
E
wheather : radiation
threshold : 13.25
memory length : 77
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
87.92 0.441 13.6 1.03 0.937 -1.1 0.166 -0.369 -0.0285 5.27 12.88 77 -- --
88.63 0.438 13.6 1.04 0.929 -1.09 0.0635 -- -0.0273 5.26 13.21 77 -- --
87.97 0.437 13.6 1.03 0.928 -1.09 -- -0.343 -0.0306 5.25 12.98 73 -- --
88.61 0.438 13.6 1.03 0.94 -1.11 -- -- -0.0311 5.21 13.25 77 -- --
114.13 0.5 13.6 1.07 -- -0.934 -- -0.308 0.0349 -- 9.01 16 -- --
107.29 0.486 13.6 1.03 1.25 -- 0.513 -- 0.0418 9.55 -- -- -- --
108.26 0.487 13.6 1.05 1.25 -- -- -- 0.0424 9.53 -- -- -- --
114.13 0.5 13.6 1.07 -- -0.931 -- -- 0.0302 -- 7.561 15 -- --
116.19 0.502 13.6 -- 0.993 -1.14 -- -- -0.155 5.27 15.7 91 -- --
200.43 0.662 13.6 1.04 -- -- -- -- 0.0457 -- -- -- -- --
137.37 0.548 13.6 -- 1.25 -- -- -- -0.0746 9.46 -- -- -- --
144.34 0.561 13.6 -- -- -0.923 -- -- -0.0884 -- 7.561 15 -- --
229.08 0.706 13.6 -- -- -- -- -- -0.0699 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 86.01 radiation 1.0 90 < th dose dependent rect. 5 14
2 86.80 radiation 1.0 90 < th dose independent rect. 5 14
3 87.25 radiation 10.0 90 < th dose dependent sin 23 NA
11 88.15 radiation 10.0 90 < th dose dependent rect. 5 23
12 88.21 radiation 1.0 30 < th dose independent sin 23 NA
15 88.51 radiation 1.0 30 > th dose independent sin 23 NA
22 88.84 radiation 20.0 90 < th dose dependent rect. 12 23
34 89.31 radiation 10.0 90 < th dose dependent no NA NA
35 89.34 radiation 10.0 90 < th dose dependent rect. 9 23
36 89.35 radiation 10.0 90 < th dose dependent rect. 15 23
47 89.56 radiation 10.0 90 < th dose dependent rect. 17 23
77 90.11 radiation 10.0 90 < th dose dependent rect. 23 23
81 90.19 radiation 10.0 90 < th dose dependent rect. 9 11
160 91.20 radiation 1.0 1440 > th dose independent rect. 11 1
163 91.23 radiation 10.0 90 > th dose independent rect. 9 23
194 91.43 radiation 10.0 90 > th dose independent no NA NA
195 91.43 radiation 10.0 90 > th dose independent rect. 6 12
273 91.44 radiation 10.0 90 < th dose dependent rect. 24 21
278 91.47 radiation 10.0 90 < th dose dependent rect. 21 23
284 91.52 humidity 70.0 10 > th dose dependent rect. 7 13
310 91.74 radiation 10.0 30 < th dose dependent rect. 7 23
319 91.85 radiation 1.0 90 < th dose independent rect. 10 9
351 91.96 humidity 90.0 720 > th dose dependent rect. 20 1
396 92.19 humidity 60.0 10 > th dose dependent rect. 13 8
416 92.38 humidity 90.0 720 < th dose independent rect. 20 2
430 92.51 humidity 60.0 10 > th dose dependent rect. 1 20
452 92.64 temperature 30.0 10 < th dose dependent rect. 1 20
456 92.66 humidity 80.0 1440 > th dose independent rect. 11 3
468 92.74 humidity 80.0 1440 < th dose independent rect. 11 3
472 92.75 radiation 1.0 720 < th dose dependent rect. 7 12
476 92.78 radiation 10.0 90 < th dose independent rect. 24 21
522 92.97 radiation 1.0 720 < th dose dependent rect. 9 10
530 92.99 radiation 10.0 90 < th dose independent rect. 24 23
583 93.18 radiation 1.0 1440 > th dose independent rect. 9 4
586 93.18 humidity 70.0 10 > th dose dependent rect. 10 10
614 93.27 precipitation 0.1 90 < th dose independent rect. 19 23
618 93.27 radiation 10.0 10 < th dose dependent rect. 24 23
619 93.27 precipitation 0.1 90 < th dose dependent rect. 19 23
635 93.33 radiation 10.0 43200 < th dose dependent rect. 22 4
641 93.34 radiation 1.0 30 < th dose independent rect. 15 5
653 93.38 humidity 70.0 10 > th dose dependent sin 23 NA
667 93.42 radiation 10.0 1440 < th dose independent rect. 22 7
685 93.49 radiation 10.0 90 < th dose independent rect. 12 23
686 93.50 humidity 80.0 10 < th dose independent rect. 7 11
710 93.60 radiation 10.0 90 < th dose independent rect. 5 23
711 93.60 humidity 60.0 720 > th dose dependent rect. 17 2
756 93.72 radiation 1.0 1440 < th dose independent rect. 11 2
757 93.72 radiation 1.0 1440 < th dose dependent rect. 11 2
779 93.78 radiation 10.0 90 < th dose independent rect. 15 23
788 93.80 radiation 1.0 1440 < th dose independent rect. 9 4
792 93.80 radiation 1.0 1440 < th dose dependent rect. 9 4
799 93.82 radiation 1.0 720 < th dose dependent rect. 22 21
807 93.84 radiation 10.0 90 < th dose independent rect. 17 22
828 93.89 temperature 10.0 30 > th dose dependent rect. 20 22
852 93.95 radiation 10.0 90 > th dose independent rect. 15 23
871 94.01 radiation 20.0 90 < th dose dependent rect. 17 17
895 94.06 humidity 90.0 10 < th dose dependent rect. 20 22
909 94.09 humidity 70.0 720 > th dose independent rect. 17 2
925 94.13 radiation 10.0 90 < th dose independent no NA NA
929 94.13 humidity 90.0 10 < th dose dependent rect. 7 11
931 94.14 precipitation 0.1 270 > th dose independent rect. 23 20
989 94.26 humidity 70.0 90 > th dose independent rect. 13 7
996 94.27 radiation 10.0 90 < th dose independent rect. 9 23