Os11g0597800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0597800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.1 | 0.376 | 3.15 | -0.141 | 0.171 | 0.57 | -0.417 | 0.0814 | -0.073 | 20.4 | 20.75 | 1306 | -- | -- |
| 63.82 | 0.372 | 3.15 | -0.158 | 0.0482 | 0.635 | -0.493 | -- | -0.0718 | 20.5 | 21.65 | 966 | -- | -- |
| 64.64 | 0.374 | 3.15 | -0.148 | 0.175 | 0.566 | -- | 0.00311 | -0.0762 | 20.4 | 21.11 | 1319 | -- | -- |
| 64.56 | 0.374 | 3.15 | -0.137 | 0.0815 | 0.618 | -- | -- | -0.0669 | 19.8 | 21.67 | 1021 | -- | -- |
| 64.8 | 0.375 | 3.14 | -0.128 | -- | 0.67 | -- | 0.0608 | -0.0611 | -- | 20.94 | 931 | -- | -- |
| 74.6 | 0.405 | 3.12 | 0.0369 | 0.193 | -- | -0.348 | -- | 0.0515 | 21.5 | -- | -- | -- | -- |
| 75.04 | 0.406 | 3.12 | 0.0493 | 0.194 | -- | -- | -- | 0.0516 | 21.8 | -- | -- | -- | -- |
| 64.71 | 0.375 | 3.15 | -0.142 | -- | 0.663 | -- | -- | -0.0739 | -- | 21.47 | 928 | -- | -- |
| 65 | 0.375 | 3.14 | -- | 0.0822 | 0.582 | -- | -- | -0.0465 | 19.3 | 21.95 | 1009 | -- | -- |
| 77.29 | 0.411 | 3.12 | 0.0513 | -- | -- | -- | -- | 0.0515 | -- | -- | -- | -- | -- |
| 75.1 | 0.405 | 3.12 | -- | 0.194 | -- | -- | -- | 0.0461 | 21.8 | -- | -- | -- | -- |
| 65.19 | 0.376 | 3.14 | -- | -- | 0.624 | -- | -- | -0.048 | -- | 22.03 | 922 | -- | -- |
| 77.36 | 0.411 | 3.12 | -- | -- | -- | -- | -- | 0.0458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.12 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 2 | 63.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 10 | 63.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 19 | 63.24 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 61 | 63.33 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 71 | 63.35 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 106 | 63.40 | humidity | 50 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 107 | 63.41 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 119 | 63.44 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 145 | 63.49 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 160 | 63.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 14 |
| 161 | 63.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 165 | 63.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 168 | 63.55 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 201 | 63.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 12 |
| 228 | 63.61 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 248 | 63.64 | temperature | 10 | 1440 | > th | dose dependent | sin | 19 | NA |
| 256 | 63.66 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 273 | 63.67 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 284 | 63.68 | temperature | 30 | 720 | < th | dose dependent | sin | 19 | NA |
| 315 | 63.73 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 322 | 63.74 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 340 | 63.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 8 |
| 353 | 63.76 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 391 | 63.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 417 | 63.82 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 437 | 63.83 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 467 | 63.87 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 495 | 63.90 | wind | 7 | 43200 | > th | dose independent | sin | 11 | NA |
| 580 | 63.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 641 | 63.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 688 | 64.02 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 719 | 64.04 | wind | 7 | 43200 | < th | dose independent | sin | 11 | NA |
| 723 | 64.04 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 739 | 64.04 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 760 | 64.06 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 4 |