Os11g0597700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0597700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.53 | 0.535 | 10.2 | 3.01 | 0.496 | -0.7 | 0.11 | 3.93 | 0.79 | 7.93 | 53.48 | 3935 | -- | -- |
| 131.62 | 0.534 | 10.3 | 2.73 | 0.496 | 0.651 | -0.166 | -- | 0.834 | 8.03 | 35 | 9972 | -- | -- |
| 129.57 | 0.53 | 10.2 | 3.01 | 0.495 | -0.703 | -- | 3.92 | 0.79 | 7.94 | 53.43 | 3937 | -- | -- |
| 131.58 | 0.534 | 10.3 | 2.73 | 0.496 | 0.651 | -- | -- | 0.834 | 8.03 | 35 | 9972 | -- | -- |
| 142.8 | 0.557 | 10.2 | 3.06 | -- | -0.892 | -- | 4.23 | 0.787 | -- | 53.53 | 3961 | -- | -- |
| 141.21 | 0.557 | 10.3 | 2.99 | 0.485 | -- | -0.154 | -- | 0.815 | 8.07 | -- | -- | -- | -- |
| 141.28 | 0.557 | 10.3 | 2.99 | 0.486 | -- | -- | -- | 0.815 | 8.03 | -- | -- | -- | -- |
| 144.53 | 0.56 | 10.3 | 2.82 | -- | 0.571 | -- | -- | 0.856 | -- | 40.08 | 9992 | -- | -- |
| 295.71 | 0.801 | 10.3 | -- | 0.535 | 1.77 | -- | -- | 0.624 | 7.76 | 35.01 | 8205 | -- | -- |
| 154.17 | 0.58 | 10.3 | 2.99 | -- | -- | -- | -- | 0.821 | -- | -- | -- | -- | -- |
| 376.15 | 0.907 | 10.4 | -- | 0.507 | -- | -- | -- | 0.483 | 7.61 | -- | -- | -- | -- |
| 310.76 | 0.821 | 10.4 | -- | -- | 1.78 | -- | -- | 0.624 | -- | 38.94 | 8721 | -- | -- |
| 389.98 | 0.922 | 10.4 | -- | -- | -- | -- | -- | 0.49 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.26 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 5 | 123.34 | humidity | 70 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 20 | 123.52 | humidity | 70 | 43200 | < th | dose independent | sin | 6 | NA |
| 37 | 123.67 | humidity | 70 | 43200 | > th | dose independent | sin | 6 | NA |
| 59 | 123.84 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 63 | 123.87 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 64 | 123.87 | humidity | 70 | 43200 | < th | dose dependent | rect. | 12 | 2 |
| 73 | 123.94 | humidity | 60 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 99 | 124.14 | humidity | 70 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 106 | 124.17 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 126 | 124.29 | humidity | 80 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 136 | 124.36 | radiation | 20 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 151 | 124.42 | wind | 3 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 182 | 124.54 | humidity | 60 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 186 | 124.54 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 17 |
| 192 | 124.55 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 20 |
| 204 | 124.59 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 214 | 124.61 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 228 | 124.63 | humidity | 70 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 296 | 124.71 | humidity | 80 | 43200 | < th | dose dependent | sin | 4 | NA |
| 398 | 124.87 | radiation | 10 | 43200 | < th | dose independent | rect. | 11 | 20 |
| 402 | 124.89 | humidity | 70 | 43200 | > th | dose independent | no | NA | NA |
| 410 | 124.90 | radiation | 10 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 426 | 124.91 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 442 | 124.93 | humidity | 70 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 465 | 124.96 | humidity | 80 | 43200 | < th | dose dependent | rect. | 9 | 22 |
| 473 | 124.97 | humidity | 70 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 485 | 124.98 | humidity | 80 | 43200 | < th | dose dependent | no | NA | NA |
| 512 | 125.01 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 23 |
| 513 | 125.02 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 523 | 125.02 | humidity | 80 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 538 | 125.03 | humidity | 80 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 576 | 125.06 | humidity | 80 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 611 | 125.10 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 7 |
| 678 | 125.15 | radiation | 10 | 43200 | < th | dose independent | sin | 18 | NA |
| 704 | 125.17 | humidity | 80 | 43200 | < th | dose dependent | sin | 12 | NA |
| 729 | 125.19 | humidity | 80 | 43200 | < th | dose dependent | rect. | 17 | 12 |
| 746 | 125.21 | humidity | 70 | 43200 | < th | dose independent | sin | 14 | NA |
| 750 | 125.21 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 792 | 125.24 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 810 | 125.25 | wind | 1 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 836 | 125.27 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 863 | 125.29 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 874 | 125.30 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 893 | 125.31 | radiation | 10 | 43200 | < th | dose independent | no | NA | NA |
| 895 | 125.31 | radiation | 30 | 43200 | > th | dose independent | rect. | 7 | 1 |