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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0597400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0222) R2 : 0.0361
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.193 (0.0467) R2dN8 : 0.0466 R2N8 : 0.0361
σ : 0.418
deviance : 80.24
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.45 0.416 2.96 0.00977 0.0756 -0.267 -0.229 2.35 0.189 3.31 0.4231 10 -- --
79.23 0.418 2.96 -0.00518 0.048 0.234 -0.106 -- 0.197 2.49 1.2 4 -- --
78.57 0.413 2.96 0.00935 0.0685 -0.327 -- 2.45 0.186 2.78 0.1238 9 -- --
79.24 0.417 2.96 -0.00515 0.0432 0.227 -- -- 0.199 1.35 1.355 4 -- --
78.85 0.414 2.95 0.0195 -- -0.238 -- 2.29 0.194 -- 0.06089 9 -- --
79.86 0.419 2.96 0.0106 0.0776 -- -0.079 -- 0.192 2.81 -- -- -- --
79.88 0.419 2.96 0.0125 0.077 -- -- -- 0.193 2.55 -- -- -- --
79.35 0.417 2.96 -0.00549 -- 0.251 -- -- 0.201 -- 1.355 4 -- --
79.24 0.417 2.96 -- 0.0432 0.226 -- -- 0.2 1.36 1.355 4 -- --
80.23 0.419 2.96 0.0157 -- -- -- -- 0.195 -- -- -- -- --
79.89 0.418 2.96 -- 0.0773 -- -- -- 0.192 2.55 -- -- -- --
79.35 0.416 2.96 -- -- 0.25 -- -- 0.201 -- 1.355 4 -- --
80.24 0.418 2.96 -- -- -- -- -- 0.193 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 69.77 atmosphere 1005.0 30 > th dose dependent rect. 2 1
2 69.78 atmosphere 1005.0 30 > th dose independent rect. 2 1
6 69.84 wind 3.0 30 < th dose independent rect. 2 1
7 69.85 temperature 10.0 30 > th dose dependent rect. 2 1
11 69.86 wind 7.0 30 < th dose dependent rect. 2 1
15 69.88 temperature 10.0 30 > th dose independent rect. 2 1
17 69.88 temperature 25.0 30 < th dose independent rect. 2 1
19 69.88 humidity 50.0 30 > th dose independent rect. 2 1
23 69.88 atmosphere 1010.0 30 < th dose independent rect. 2 1
25 69.88 radiation 1.0 30 < th dose independent rect. 2 1
30 69.88 precipitation 0.1 30 < th dose independent rect. 2 1
31 69.88 temperature 10.0 30 > th dose independent rect. 3 23
33 69.88 radiation 1.0 30 < th dose dependent rect. 2 1
38 69.88 precipitation 0.1 30 < th dose dependent rect. 2 1
40 69.92 humidity 50.0 30 > th dose dependent rect. 2 1
47 70.13 atmosphere 1015.0 30 < th dose dependent rect. 2 1
48 70.16 temperature 30.0 30 < th dose dependent rect. 2 1
51 70.32 wind 1.0 30 > th dose independent rect. 2 1
98 71.35 radiation 10.0 43200 < th dose dependent rect. 3 1
103 71.45 wind 9.0 1440 < th dose independent rect. 3 1
104 71.45 temperature 10.0 1440 > th dose independent rect. 3 1
107 71.45 temperature 30.0 1440 < th dose independent rect. 3 1
111 71.45 humidity 50.0 1440 > th dose independent rect. 3 1
120 71.45 atmosphere 995.0 1440 > th dose independent rect. 3 1
121 71.45 radiation 1.0 1440 < th dose independent rect. 3 1
141 71.45 temperature 10.0 1440 > th dose independent rect. 4 23
144 71.45 radiation 1.0 1440 < th dose dependent rect. 3 1
159 71.82 wind 9.0 30 < th dose independent rect. 3 23
165 72.28 atmosphere 995.0 30 > th dose independent rect. 3 23
168 72.55 precipitation 0.1 30 < th dose independent rect. 3 23
169 72.55 precipitation 0.1 30 < th dose dependent rect. 3 23
194 74.86 humidity 50.0 30 > th dose independent rect. 3 23
206 75.50 temperature 30.0 30 < th dose independent rect. 3 23
244 75.89 wind 1.0 30 < th dose independent rect. 10 1
245 75.89 temperature 10.0 1440 > th dose independent rect. 11 1
249 75.89 atmosphere 995.0 1440 > th dose independent rect. 11 1
252 75.89 precipitation 0.1 1440 < th dose independent rect. 11 1
253 75.89 temperature 10.0 1440 > th dose independent rect. 12 23
256 75.89 wind 1.0 30 < th dose dependent rect. 10 1
257 75.89 precipitation 0.1 1440 < th dose dependent rect. 11 1
261 76.03 temperature 25.0 30 > th dose dependent rect. 10 1
262 76.04 humidity 70.0 30 < th dose independent rect. 10 1
268 76.12 atmosphere 1015.0 30 < th dose independent rect. 3 23
270 76.16 radiation 20.0 30 > th dose independent rect. 10 1
272 76.18 humidity 80.0 30 < th dose dependent rect. 10 1
278 76.27 atmosphere 1010.0 30 < th dose independent rect. 10 1
284 76.32 temperature 25.0 30 > th dose independent rect. 10 1
288 76.39 atmosphere 1005.0 30 > th dose independent rect. 10 1
289 76.40 humidity 90.0 90 < th dose independent rect. 2 1
290 76.40 radiation 40.0 30 < th dose independent rect. 10 1
291 76.40 atmosphere 1000.0 30 > th dose dependent rect. 10 1
296 76.43 radiation 1.0 30 > th dose dependent rect. 10 1
298 76.45 temperature 30.0 30 < th dose independent rect. 10 1
299 76.45 humidity 60.0 30 > th dose independent rect. 10 1
300 76.47 wind 5.0 30 < th dose independent rect. 10 1
304 76.47 wind 9.0 30 < th dose dependent rect. 10 1
306 76.48 temperature 10.0 30 > th dose independent rect. 10 1
313 76.48 precipitation 0.1 30 < th dose independent rect. 10 1
314 76.48 temperature 10.0 30 > th dose independent rect. 11 23
317 76.48 precipitation 0.1 30 < th dose dependent rect. 10 1
318 76.50 wind 1.0 30 > th dose independent rect. 10 1
329 76.58 wind 1.0 10 < th dose independent rect. 23 4
343 76.78 wind 1.0 10 < th dose independent rect. 17 10
347 76.78 atmosphere 1015.0 30 < th dose dependent rect. 10 1
352 76.79 wind 9.0 30 < th dose independent rect. 11 23
353 76.82 wind 1.0 30 > th dose dependent rect. 10 1
360 76.95 radiation 20.0 30 < th dose dependent rect. 3 23
361 76.96 radiation 40.0 30 < th dose dependent rect. 10 1
367 77.02 wind 1.0 10 < th dose independent rect. 11 16
371 77.04 wind 1.0 10 < th dose independent rect. 8 19
376 77.06 humidity 50.0 30 > th dose dependent rect. 10 1
381 77.09 temperature 25.0 10 > th dose independent rect. 24 7
388 77.12 radiation 10.0 10 < th dose independent rect. 3 23
429 77.24 radiation 20.0 720 > th dose independent rect. 15 2
466 77.31 temperature 10.0 720 > th dose independent rect. 3 8
467 77.31 atmosphere 995.0 720 > th dose independent rect. 3 8
468 77.31 temperature 10.0 720 > th dose independent rect. 11 16
469 77.31 atmosphere 995.0 720 > th dose independent rect. 11 16
471 77.32 temperature 10.0 720 > th dose independent rect. 15 8
472 77.32 atmosphere 995.0 720 > th dose independent rect. 15 8
473 77.32 temperature 10.0 720 > th dose independent rect. 23 16
474 77.32 atmosphere 995.0 720 > th dose independent rect. 23 16
475 77.32 wind 1.0 10 > th dose independent rect. 23 23
478 77.35 wind 9.0 720 < th dose independent rect. 3 8
481 77.36 humidity 50.0 720 > th dose independent rect. 3 8
485 77.37 wind 1.0 30 < th dose dependent rect. 23 4
488 77.38 wind 1.0 10 > th dose independent rect. 12 19
497 77.43 temperature 25.0 270 > th dose independent rect. 23 4
517 77.47 temperature 15.0 90 > th dose dependent rect. 3 4
532 77.54 precipitation 0.1 720 < th dose independent rect. 15 8
534 77.54 precipitation 0.1 720 < th dose dependent rect. 15 8
535 77.55 wind 1.0 10 > th dose independent rect. 24 7
536 77.55 wind 1.0 10 > th dose independent rect. 18 13
537 77.55 atmosphere 995.0 90 > th dose dependent rect. 19 8
546 77.58 wind 1.0 30 < th dose dependent rect. 17 10
576 77.62 wind 1.0 10 > th dose independent rect. 16 15
577 77.62 wind 1.0 10 > th dose independent rect. 14 17
590 77.64 atmosphere 1000.0 10 > th dose dependent rect. 20 8
597 77.67 temperature 20.0 90 < th dose independent rect. 22 1
607 77.68 temperature 25.0 270 > th dose dependent rect. 22 10
608 77.68 wind 9.0 90 < th dose dependent rect. 15 12
613 77.69 precipitation 0.1 720 < th dose independent rect. 3 8
616 77.69 precipitation 0.1 720 < th dose dependent rect. 3 8
617 77.70 wind 1.0 10 > th dose independent sin 16 NA
633 77.70 temperature 20.0 90 > th dose independent rect. 3 4
643 77.70 wind 9.0 90 < th dose dependent rect. 7 20
646 77.71 wind 3.0 30 < th dose dependent rect. 8 19
655 77.73 temperature 10.0 30 > th dose dependent rect. 3 23
656 77.74 humidity 70.0 90 > th dose independent rect. 3 4
657 77.74 radiation 20.0 90 < th dose independent rect. 3 4
659 77.74 radiation 10.0 720 > th dose dependent rect. 15 1
664 77.74 wind 9.0 90 < th dose dependent rect. 19 8
671 77.75 wind 7.0 90 < th dose independent rect. 3 4
673 77.75 temperature 10.0 90 > th dose independent rect. 3 4
675 77.75 temperature 30.0 90 < th dose independent rect. 3 4
676 77.75 humidity 50.0 90 > th dose independent rect. 3 4
678 77.75 atmosphere 995.0 90 > th dose independent rect. 3 4
679 77.75 atmosphere 1015.0 90 < th dose independent rect. 3 4
682 77.75 precipitation 0.1 90 < th dose independent rect. 3 4
683 77.75 temperature 10.0 90 > th dose independent rect. 7 20
684 77.75 precipitation 0.1 90 < th dose independent rect. 7 20
685 77.75 precipitation 0.1 90 < th dose dependent rect. 3 4
686 77.75 precipitation 0.1 90 < th dose dependent rect. 7 20
691 77.76 radiation 20.0 43200 < th dose dependent rect. 23 1
696 77.77 precipitation 0.1 720 < th dose independent rect. 11 16
699 77.77 atmosphere 995.0 90 > th dose dependent rect. 3 4
701 77.77 precipitation 0.1 720 < th dose dependent rect. 11 16
714 77.79 radiation 40.0 90 < th dose dependent rect. 3 4
718 77.80 temperature 25.0 270 > th dose independent rect. 22 11
723 77.80 wind 5.0 30 < th dose dependent rect. 15 12
729 77.82 radiation 10.0 10 < th dose independent rect. 4 3
731 77.82 wind 9.0 90 < th dose independent rect. 7 20
735 77.82 wind 9.0 90 < th dose dependent rect. 3 4
740 77.83 wind 5.0 90 < th dose independent rect. 19 8
741 77.83 precipitation 0.1 720 < th dose independent rect. 23 16
745 77.83 humidity 50.0 90 > th dose dependent rect. 3 4
748 77.83 precipitation 0.1 720 < th dose dependent rect. 23 16
749 77.83 wind 3.0 30 < th dose dependent rect. 10 17
762 77.85 atmosphere 995.0 10 > th dose dependent rect. 4 3
803 77.89 precipitation 0.1 10 < th dose independent rect. 7 21
811 77.89 precipitation 0.1 10 < th dose dependent rect. 7 21
827 77.90 temperature 25.0 270 > th dose independent rect. 19 14
858 77.91 radiation 10.0 90 < th dose independent rect. 3 6
887 77.93 atmosphere 1005.0 10 > th dose independent rect. 4 3
891 77.93 temperature 25.0 270 > th dose dependent rect. 22 5
896 77.94 wind 5.0 10 < th dose independent rect. 4 3
897 77.94 wind 9.0 10 < th dose independent rect. 4 3
898 77.94 temperature 10.0 10 > th dose independent rect. 4 3
900 77.94 temperature 30.0 10 < th dose independent rect. 4 3
901 77.94 humidity 50.0 10 > th dose independent rect. 4 3
904 77.94 atmosphere 995.0 10 > th dose independent rect. 4 3
905 77.94 atmosphere 1015.0 10 < th dose independent rect. 4 3
909 77.94 precipitation 0.1 10 < th dose independent rect. 4 3
910 77.94 temperature 10.0 10 > th dose independent rect. 7 21
913 77.94 precipitation 0.1 10 < th dose dependent rect. 4 3
922 77.94 humidity 50.0 30 > th dose dependent rect. 3 23
934 77.95 atmosphere 1015.0 720 < th dose independent rect. 3 8
943 77.95 atmosphere 1015.0 720 < th dose independent rect. 23 16
978 77.96 radiation 1.0 90 < th dose dependent rect. 13 14
984 77.97 wind 1.0 90 > th dose independent rect. 3 4
993 77.97 radiation 40.0 10 < th dose dependent rect. 4 3