Os11g0596200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0596200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.56 | 0.429 | 8.19 | -1.24 | 0.0399 | -2.32 | 1.74 | -1.09 | -0.0537 | 1.9 | 30.36 | 133 | -- | -- |
| 84.62 | 0.428 | 8.22 | -1.42 | 0.0138 | -2.31 | 1.43 | -- | -0.089 | 1.75 | 30.74 | 149 | -- | -- |
| 92.28 | 0.447 | 8.22 | -1.55 | 0.0607 | -2.28 | -- | 0.389 | -0.112 | 5.91 | 30.72 | 143 | -- | -- |
| 92.44 | 0.448 | 8.22 | -1.48 | 0.043 | -2.28 | -- | -- | -0.109 | 5.98 | 30.34 | 149 | -- | -- |
| 92.3 | 0.447 | 8.22 | -1.54 | -- | -2.26 | -- | 0.453 | -0.12 | -- | 30.46 | 142 | -- | -- |
| 154.27 | 0.582 | 8.12 | -0.89 | 0.701 | -- | -1.17 | -- | 0.326 | 15 | -- | -- | -- | -- |
| 158.73 | 0.59 | 8.13 | -0.916 | 0.704 | -- | -- | -- | 0.32 | 15.3 | -- | -- | -- | -- |
| 92.52 | 0.448 | 8.22 | -1.47 | -- | -2.24 | -- | -- | -0.105 | -- | 30.24 | 148 | -- | -- |
| 142.81 | 0.56 | 8.16 | -- | 0.258 | -1.61 | -- | -- | 0.162 | 17.6 | 30.34 | 149 | -- | -- |
| 186.75 | 0.639 | 8.13 | -0.945 | -- | -- | -- | -- | 0.301 | -- | -- | -- | -- | -- |
| 180.83 | 0.629 | 8.1 | -- | 0.722 | -- | -- | -- | 0.422 | 15.3 | -- | -- | -- | -- |
| 144.8 | 0.56 | 8.16 | -- | -- | -1.9 | -- | -- | 0.164 | -- | 32.34 | 129 | -- | -- |
| 210.33 | 0.677 | 8.1 | -- | -- | -- | -- | -- | 0.406 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.42 | temperature | 30 | 720 | < th | dose dependent | sin | 22 | NA |
| 3 | 72.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 13 |
| 6 | 72.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 11 |
| 28 | 75.84 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 29 | 75.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 69 | 78.60 | temperature | 25 | 720 | < th | dose independent | sin | 22 | NA |
| 70 | 78.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 89 | 79.49 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 14 |
| 93 | 79.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 98 | 79.81 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 115 | 80.34 | temperature | 15 | 720 | > th | dose dependent | sin | 21 | NA |
| 116 | 80.41 | temperature | 25 | 720 | > th | dose independent | sin | 21 | NA |
| 133 | 80.74 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 15 |
| 148 | 81.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 291 | 82.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 392 | 83.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 396 | 83.98 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 397 | 83.98 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 406 | 84.08 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 421 | 84.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 492 | 84.70 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 525 | 85.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 541 | 85.19 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 548 | 85.23 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 622 | 85.70 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 661 | 85.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 675 | 85.99 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 776 | 86.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 823 | 86.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 838 | 86.65 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 864 | 86.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 929 | 87.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 23 |