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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0594400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF295 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.05 (0.0159) R2 : 0.00126
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0254 (0.0335) R2dN8 : 0.00163 R2N8 : 0.00126
σ : 0.3
deviance : 41.3
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.95 0.293 3.12 -0.383 0.0806 1.38 -0.34 -6.53 -0.00954 5 999.9 250 -- --
39.54 0.295 3.05 0.0153 0.0856 0.197 -0.319 -- -0.00992 5.03 999.9 250 -- --
39.15 0.291 3.11 -0.334 0.0893 1.29 -- -6.01 -0.00768 6.28 999.7 208 -- --
39.67 0.293 3.04 0.0115 0.0891 0.223 -- -- -0.00404 6.17 999.6 170 -- --
39.55 0.293 3.11 -0.345 -- 1.31 -- -6.14 -0.00581 -- 999.6 203 -- --
40.6 0.299 3.05 0.0504 0.0816 -- -0.333 -- -0.0231 4.99 -- -- -- --
40.83 0.299 3.05 0.0517 0.0869 -- -- -- -0.0213 6.4 -- -- -- --
40.07 0.295 3.05 0.0181 -- 0.221 -- -- -0.00598 -- 999.7 148 -- --
39.67 0.293 3.04 -- 0.0876 0.228 -- -- -0.00969 6.26 999.7 158 -- --
41.22 0.3 3.05 0.054 -- -- -- -- -0.0194 -- -- -- -- --
40.9 0.299 3.05 -- 0.0876 -- -- -- -0.027 6.36 -- -- -- --
40.08 0.295 3.05 -- -- 0.224 -- -- -0.0078 -- 999.7 148 -- --
41.3 0.3 3.05 -- -- -- -- -- -0.0254 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.63 atmosphere 1000.0 10 < th dose independent rect. 17 1
8 36.63 atmosphere 1000.0 10 < th dose dependent rect. 17 1
47 37.15 atmosphere 1000.0 90 > th dose independent rect. 3 23
60 37.63 wind 3.0 90 < th dose independent rect. 2 1
61 37.64 atmosphere 1000.0 10 > th dose independent rect. 5 21
65 37.68 temperature 20.0 90 < th dose dependent rect. 2 1
67 37.78 wind 5.0 30 < th dose independent rect. 2 3
69 37.81 atmosphere 1000.0 30 > th dose dependent rect. 2 3
76 37.91 wind 5.0 90 < th dose dependent rect. 2 1
80 37.96 wind 9.0 1440 < th dose independent rect. 3 3
81 37.96 temperature 10.0 1440 > th dose independent rect. 3 3
84 37.96 temperature 30.0 1440 < th dose independent rect. 3 3
88 37.96 humidity 50.0 1440 > th dose independent rect. 3 3
97 37.96 atmosphere 995.0 1440 > th dose independent rect. 3 3
98 37.96 radiation 20.0 1440 < th dose independent rect. 3 3
107 37.96 temperature 10.0 1440 > th dose independent rect. 6 21
111 37.97 temperature 20.0 90 < th dose independent rect. 2 1
112 37.97 precipitation 0.1 30 < th dose independent rect. 2 3
113 37.97 wind 9.0 30 < th dose dependent rect. 2 3
114 37.97 precipitation 0.1 30 < th dose dependent rect. 2 3
125 38.01 temperature 10.0 30 > th dose independent rect. 2 3
127 38.01 temperature 30.0 30 < th dose independent rect. 2 3
128 38.01 humidity 50.0 30 > th dose independent rect. 2 3
132 38.01 atmosphere 995.0 30 > th dose independent rect. 2 3
133 38.01 atmosphere 1010.0 30 < th dose independent rect. 2 3
135 38.01 radiation 1.0 30 < th dose independent rect. 2 3
140 38.01 wind 9.0 30 < th dose independent rect. 5 21
141 38.01 temperature 10.0 30 > th dose independent rect. 5 21
142 38.01 precipitation 0.1 30 < th dose independent rect. 5 21
143 38.01 temperature 30.0 90 < th dose dependent rect. 2 1
144 38.01 radiation 10.0 30 < th dose dependent rect. 2 3
149 38.01 precipitation 0.1 30 < th dose dependent rect. 5 21
194 38.10 humidity 50.0 30 > th dose dependent rect. 2 3
199 38.12 atmosphere 995.0 90 > th dose dependent rect. 2 1
206 38.17 radiation 1.0 30 < th dose dependent rect. 2 12
211 38.19 radiation 1.0 10 < th dose independent rect. 2 12
213 38.19 temperature 10.0 30 > th dose dependent rect. 2 3
216 38.20 temperature 10.0 90 > th dose independent rect. 2 1
218 38.20 temperature 30.0 90 < th dose independent rect. 2 1
219 38.20 humidity 50.0 90 > th dose independent rect. 2 1
222 38.20 atmosphere 995.0 90 > th dose independent rect. 2 1
223 38.20 atmosphere 1010.0 90 < th dose independent rect. 2 1
225 38.20 radiation 1.0 90 < th dose independent rect. 2 1
230 38.20 precipitation 0.1 90 < th dose independent rect. 2 1
232 38.20 temperature 10.0 90 > th dose independent rect. 3 23
233 38.20 radiation 1.0 90 < th dose dependent rect. 2 1
238 38.20 precipitation 0.1 90 < th dose dependent rect. 2 1
240 38.20 temperature 30.0 30 < th dose dependent rect. 2 3
247 38.24 wind 1.0 90 > th dose independent rect. 2 1
248 38.24 temperature 30.0 90 > th dose independent rect. 16 1
249 38.24 atmosphere 1000.0 90 < th dose independent rect. 7 11
254 38.24 humidity 50.0 90 > th dose dependent rect. 2 1
261 38.26 radiation 1.0 30 < th dose dependent rect. 2 10
266 38.27 atmosphere 1000.0 10 > th dose independent rect. 16 10
269 38.27 radiation 1.0 30 < th dose dependent rect. 2 6
274 38.28 atmosphere 1000.0 270 < th dose independent rect. 5 13
284 38.29 radiation 1.0 10 < th dose independent rect. 2 6
294 38.30 atmosphere 1000.0 10 > th dose independent rect. 2 14
299 38.31 precipitation 0.1 90 < th dose independent rect. 3 23
300 38.31 temperature 25.0 90 > th dose dependent rect. 2 2
302 38.31 precipitation 0.1 90 < th dose dependent rect. 3 23
314 38.33 humidity 50.0 30 > th dose independent rect. 5 21
315 38.33 temperature 25.0 90 > th dose dependent rect. 1 4
316 38.34 wind 1.0 30 > th dose independent rect. 2 3
322 38.37 atmosphere 1015.0 30 < th dose independent rect. 5 21
325 38.38 temperature 25.0 90 > th dose independent rect. 1 3
329 38.39 temperature 25.0 270 > th dose independent rect. 2 1
337 38.40 wind 9.0 90 < th dose independent rect. 3 23
346 38.43 wind 9.0 10 < th dose independent rect. 16 10
354 38.45 radiation 10.0 10 < th dose independent rect. 16 10
356 38.45 radiation 30.0 10 < th dose dependent rect. 16 10
358 38.46 temperature 10.0 10 > th dose independent rect. 16 10
359 38.46 humidity 50.0 10 > th dose independent rect. 16 10
360 38.46 radiation 30.0 10 < th dose independent rect. 16 10
362 38.46 temperature 10.0 10 > th dose independent rect. 2 14
364 38.46 atmosphere 1015.0 10 < th dose independent rect. 2 14
371 38.48 radiation 10.0 10 < th dose independent rect. 14 12
372 38.48 precipitation 0.1 10 < th dose independent rect. 2 14
377 38.48 precipitation 0.1 10 < th dose dependent rect. 2 14
381 38.49 precipitation 0.1 10 < th dose independent rect. 16 10
385 38.49 precipitation 0.1 10 < th dose dependent rect. 16 10
393 38.50 radiation 40.0 10 < th dose dependent rect. 14 12
398 38.51 atmosphere 995.0 1440 > th dose independent rect. 3 12
434 38.53 temperature 30.0 10 < th dose independent rect. 16 10
436 38.53 temperature 30.0 30 < th dose independent rect. 2 14
437 38.53 atmosphere 1000.0 90 < th dose independent rect. 7 19
446 38.54 atmosphere 1015.0 30 < th dose dependent rect. 2 3
467 38.56 atmosphere 1015.0 90 < th dose dependent rect. 2 1
471 38.57 atmosphere 1000.0 270 < th dose independent rect. 5 18
472 38.57 temperature 10.0 90 > th dose dependent rect. 2 1
476 38.57 radiation 20.0 10 < th dose dependent rect. 14 12
488 38.59 temperature 30.0 30 < th dose independent rect. 5 21
490 38.60 temperature 10.0 1440 > th dose independent rect. 17 10
493 38.60 radiation 30.0 1440 < th dose independent rect. 17 10
502 38.60 temperature 10.0 1440 > th dose independent rect. 3 14
507 38.61 atmosphere 1000.0 270 < th dose independent sin 23 NA
511 38.61 wind 1.0 30 > th dose independent rect. 5 21
516 38.62 wind 9.0 10 < th dose independent rect. 2 14
547 38.66 atmosphere 1000.0 90 < th dose independent rect. 24 18
581 38.68 atmosphere 1000.0 270 > th dose independent sin 23 NA
639 38.71 atmosphere 1000.0 90 > th dose independent rect. 11 18
729 38.75 temperature 25.0 1440 > th dose independent rect. 1 1
746 38.75 atmosphere 1000.0 270 < th dose independent rect. 13 5
747 38.75 atmosphere 1000.0 10 > th dose independent rect. 14 12
825 38.80 radiation 10.0 10 < th dose independent rect. 11 15
848 38.81 atmosphere 1000.0 90 < th dose independent rect. 16 19
854 38.82 temperature 25.0 1440 < th dose independent rect. 1 1
856 38.82 atmosphere 1000.0 270 < th dose independent rect. 14 1
861 38.82 atmosphere 1000.0 270 > th dose independent rect. 14 10
880 38.83 atmosphere 1000.0 10 > th dose independent rect. 2 12
881 38.83 radiation 40.0 30 < th dose independent rect. 14 12
882 38.83 temperature 30.0 270 < th dose independent rect. 24 14
883 38.83 atmosphere 1000.0 270 > th dose independent rect. 24 14
889 38.83 temperature 30.0 270 < th dose independent rect. 10 18
927 38.85 atmosphere 1000.0 270 > th dose independent rect. 9 20
939 38.86 humidity 60.0 10 > th dose independent rect. 14 12
941 38.86 humidity 50.0 30 > th dose independent rect. 2 14
955 38.87 temperature 30.0 270 < th dose independent rect. 10 11
959 38.87 temperature 30.0 270 < th dose independent rect. 9 20
973 38.87 radiation 10.0 10 < th dose dependent rect. 11 15
992 38.88 wind 9.0 720 < th dose dependent rect. 2 1
993 38.88 radiation 1.0 43200 < th dose dependent rect. 3 1