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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0593900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.99 (0.0255) R2 : 0.00692
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0957 (0.0537) R2dN8 : 0.00893 R2N8 : 0.00692
σ : 0.48
deviance : 105.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100 0.47 3 -0.143 0.0473 -0.359 -0.711 1.56 0.0694 6.15 1 16 -- --
101.48 0.473 2.99 -0.0796 0.0625 -0.239 -0.858 -- 0.087 5.68 1.1 16 -- --
101.17 0.472 3 -0.152 0.0473 -0.338 -- 1.38 0.0759 6.5 1 16 -- --
103.27 0.476 2.99 -0.0826 0.0615 -0.226 -- -- 0.0904 6.09 1.1 16 -- --
101.27 0.471 3 -0.154 -- -0.356 -- 1.4 0.0768 -- 1 16 -- --
103.3 0.476 2.99 -0.0542 0.13 -- -0.804 -- 0.0832 5.56 -- -- -- --
104.88 0.48 2.99 -0.0579 0.126 -- -- -- 0.0865 5.09 -- -- -- --
103.45 0.476 2.99 -0.0837 -- -0.25 -- -- 0.092 -- 1.067 16 -- --
103.45 0.476 2.98 -- 0.0623 -0.219 -- -- 0.0994 6.09 1.043 16 -- --
105.71 0.48 2.99 -0.0534 -- -- -- -- 0.0897 -- -- -- -- --
104.97 0.479 2.98 -- 0.125 -- -- -- 0.093 5.1 -- -- -- --
103.63 0.476 2.98 -- -- -0.242 -- -- 0.101 -- 1.026 16 -- --
105.78 0.48 2.99 -- -- -- -- -- 0.0957 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 88.54 temperature 25.0 90 > th dose independent rect. 1 3
2 88.73 temperature 25.0 90 > th dose dependent rect. 1 3
5 90.66 temperature 25.0 90 > th dose independent rect. 2 1
8 90.84 atmosphere 1005.0 30 > th dose dependent rect. 2 1
10 90.88 atmosphere 1005.0 30 > th dose independent rect. 2 1
12 90.90 wind 3.0 30 < th dose dependent rect. 2 1
19 90.96 wind 1.0 30 < th dose independent rect. 2 1
22 90.97 radiation 10.0 43200 < th dose dependent rect. 3 1
24 90.98 humidity 80.0 30 > th dose independent rect. 2 1
32 91.02 wind 9.0 30 < th dose independent rect. 2 1
33 91.02 temperature 10.0 30 > th dose independent rect. 2 1
36 91.02 temperature 30.0 30 < th dose independent rect. 2 1
37 91.02 humidity 50.0 30 > th dose independent rect. 2 1
40 91.02 atmosphere 995.0 30 > th dose independent rect. 2 1
42 91.02 atmosphere 1010.0 30 < th dose independent rect. 2 1
44 91.02 radiation 1.0 30 < th dose independent rect. 2 1
49 91.02 precipitation 0.1 30 < th dose independent rect. 2 1
50 91.02 temperature 10.0 30 > th dose independent rect. 3 23
51 91.02 humidity 50.0 30 > th dose dependent rect. 2 1
54 91.02 radiation 1.0 30 < th dose dependent rect. 2 1
60 91.02 precipitation 0.1 30 < th dose dependent rect. 2 1
65 91.04 wind 9.0 1440 < th dose independent rect. 3 1
66 91.04 temperature 10.0 1440 > th dose independent rect. 3 1
69 91.04 temperature 30.0 1440 < th dose independent rect. 3 1
73 91.04 humidity 50.0 1440 > th dose independent rect. 3 1
82 91.04 atmosphere 995.0 1440 > th dose independent rect. 3 1
83 91.04 radiation 1.0 1440 < th dose independent rect. 3 1
103 91.04 temperature 10.0 1440 > th dose independent rect. 4 23
106 91.04 radiation 1.0 1440 < th dose dependent rect. 3 1
123 91.09 atmosphere 995.0 30 > th dose independent rect. 3 23
126 91.16 atmosphere 1015.0 30 < th dose dependent rect. 2 1
131 91.24 temperature 30.0 30 < th dose dependent rect. 2 1
132 91.25 precipitation 0.1 30 < th dose independent rect. 3 23
134 91.25 precipitation 0.1 30 < th dose dependent rect. 3 23
138 91.34 wind 1.0 30 > th dose independent rect. 2 1
188 91.94 wind 9.0 30 < th dose independent rect. 3 23
198 92.83 humidity 50.0 30 > th dose independent rect. 3 23
213 93.80 atmosphere 1005.0 10 > th dose dependent rect. 2 3
230 95.03 atmosphere 1015.0 30 < th dose independent rect. 3 23
234 95.19 precipitation 0.1 10 > th dose independent rect. 17 1
262 95.19 precipitation 0.1 10 > th dose dependent rect. 17 1
290 95.22 humidity 90.0 10 > th dose independent rect. 17 1
300 95.22 humidity 90.0 10 > th dose dependent rect. 17 1
320 95.62 temperature 20.0 10 > th dose dependent rect. 2 3
324 95.66 temperature 30.0 30 < th dose independent rect. 3 23
357 96.28 temperature 25.0 1440 < th dose independent rect. 1 1
456 97.59 humidity 90.0 90 < th dose independent rect. 2 1
485 97.83 wind 1.0 10 < th dose independent rect. 11 16
507 98.08 wind 1.0 270 < th dose dependent rect. 8 1
533 98.42 atmosphere 1005.0 10 > th dose independent rect. 2 3
541 98.47 wind 9.0 30 < th dose dependent rect. 3 23
543 98.51 wind 1.0 270 < th dose independent rect. 8 1
553 98.58 humidity 80.0 4320 < th dose dependent rect. 1 1
574 98.70 temperature 20.0 10 > th dose independent rect. 2 3
588 98.76 radiation 1.0 90 < th dose independent rect. 16 1
600 98.84 wind 1.0 30 < th dose dependent rect. 11 1
609 98.87 wind 1.0 30 > th dose dependent rect. 2 1
631 98.93 temperature 10.0 30 > th dose dependent rect. 3 23
686 99.18 atmosphere 1015.0 1440 < th dose independent rect. 3 1
688 99.18 wind 1.0 10 > th dose independent rect. 5 23
718 99.33 wind 1.0 30 > th dose independent rect. 3 23
719 99.33 wind 1.0 10 > th dose independent rect. 12 23
729 99.38 radiation 1.0 30 < th dose dependent rect. 2 16
745 99.44 wind 1.0 10 > th dose independent sin 16 NA
754 99.46 wind 1.0 10 > th dose independent rect. 24 11
768 99.53 radiation 1.0 10 < th dose dependent rect. 2 5
789 99.59 temperature 25.0 90 < th dose independent rect. 16 1
792 99.59 humidity 80.0 4320 < th dose independent rect. 22 5
794 99.59 humidity 50.0 30 > th dose dependent rect. 3 23
795 99.60 humidity 90.0 270 > th dose dependent rect. 14 1
798 99.61 humidity 90.0 270 > th dose independent rect. 14 1
800 99.61 radiation 1.0 10 < th dose independent rect. 2 4
821 99.64 humidity 80.0 4320 > th dose independent rect. 22 5
851 99.70 temperature 25.0 270 < th dose independent rect. 21 10
881 99.79 temperature 10.0 30 > th dose dependent rect. 3 8
903 99.83 wind 3.0 1440 < th dose independent rect. 2 1
913 99.86 wind 3.0 1440 > th dose independent rect. 2 1
934 99.89 temperature 15.0 10 > th dose dependent rect. 5 6
939 99.90 wind 1.0 10 > th dose independent rect. 16 19
942 99.92 atmosphere 1000.0 720 > th dose independent rect. 6 9
943 99.92 temperature 25.0 30 > th dose independent rect. 12 23
978 99.95 wind 1.0 10 > th dose independent rect. 20 15
988 99.97 radiation 1.0 30 < th dose independent rect. 2 16
992 99.99 humidity 80.0 4320 < th dose independent rect. 1 1