FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0593000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Phosphoesterase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.91 (0.0162) R2 : 0.00724
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0622 (0.0341) R2dN8 : 0.00935 R2N8 : 0.00724
σ : 0.305
deviance : 42.77
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.64 0.303 2.85 0.557 0.0355 -0.287 -0.000528 2.22 0.163 1.53 26.91 1700 -- --
42.41 0.306 2.91 0.076 0.0256 -0.0812 -0.0989 -- 0.0693 4.66 26.74 1714 -- --
41.64 0.301 2.85 0.552 0.034 -0.292 -- 2.26 0.159 1.6 27.05 1715 -- --
42.4 0.303 2.91 0.093 0.0609 -0.0692 -- -- 0.083 3.64 18 1234 -- --
41.72 0.301 2.85 0.57 -- -0.298 -- 2.32 0.164 -- 27.02 1714 -- --
42.49 0.306 2.91 0.0652 0.051 -- -0.0391 -- 0.0682 3.29 -- -- -- --
42.5 0.305 2.91 0.066 0.0506 -- -- -- 0.0685 3.05 -- -- -- --
42.49 0.305 2.91 0.0783 -- -0.0922 -- -- 0.0701 -- 27.02 1714 -- --
42.57 0.304 2.91 -- 0.0586 -0.0404 -- -- 0.0678 2.9 20.66 1186 -- --
42.64 0.305 2.91 0.0681 -- -- -- -- 0.0698 -- -- -- -- --
42.61 0.305 2.91 -- 0.0519 -- -- -- 0.0611 3.06 -- -- -- --
42.62 0.305 2.91 -- -- -0.0849 -- -- 0.0626 -- 26.47 1710 -- --
42.77 0.305 2.91 -- -- -- -- -- 0.0622 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.43 wind 9.0 1440 < th dose independent rect. 23 1
2 25.43 temperature 10.0 1440 > th dose independent rect. 23 1
5 25.43 temperature 30.0 1440 < th dose independent rect. 23 1
9 25.43 humidity 50.0 1440 > th dose independent rect. 23 1
19 25.43 atmosphere 995.0 1440 > th dose independent rect. 23 1
20 25.43 radiation 1.0 1440 < th dose independent rect. 23 1
40 25.43 temperature 10.0 1440 > th dose independent rect. 24 23
43 25.43 radiation 1.0 1440 < th dose dependent rect. 23 1
48 25.54 humidity 90.0 30 < th dose independent rect. 22 1
49 25.56 temperature 25.0 30 > th dose independent rect. 22 1
50 25.56 atmosphere 1005.0 30 > th dose dependent rect. 22 1
51 25.58 temperature 20.0 30 > th dose dependent rect. 22 1
56 25.68 atmosphere 1005.0 30 > th dose independent rect. 22 1
59 25.75 precipitation 0.1 30 < th dose independent rect. 22 1
60 25.75 precipitation 0.1 30 < th dose dependent rect. 22 1
61 25.79 wind 1.0 30 > th dose independent rect. 22 1
62 25.79 wind 3.0 30 < th dose independent rect. 22 1
65 25.81 humidity 80.0 30 > th dose independent rect. 22 1
69 25.82 temperature 10.0 30 > th dose independent rect. 22 1
71 25.82 temperature 30.0 30 < th dose independent rect. 22 1
72 25.82 humidity 50.0 30 > th dose independent rect. 22 1
76 25.82 atmosphere 1010.0 30 < th dose independent rect. 22 1
78 25.82 radiation 1.0 30 < th dose independent rect. 22 1
83 25.82 temperature 10.0 30 > th dose independent rect. 23 23
84 25.82 wind 9.0 30 < th dose dependent rect. 22 1
85 25.82 radiation 1.0 30 < th dose dependent rect. 22 1
93 25.93 humidity 50.0 30 > th dose dependent rect. 22 1
95 26.01 humidity 90.0 30 < th dose dependent rect. 22 1
98 26.24 wind 1.0 30 > th dose dependent rect. 22 1
100 26.44 atmosphere 1015.0 30 < th dose dependent rect. 22 1
103 26.84 temperature 30.0 30 < th dose dependent rect. 22 1
111 27.33 wind 9.0 30 < th dose independent rect. 23 23
174 35.87 precipitation 0.1 30 < th dose independent rect. 23 23
175 35.87 precipitation 0.1 30 < th dose dependent rect. 23 23
177 35.96 atmosphere 995.0 30 > th dose independent rect. 23 23
187 38.17 atmosphere 1015.0 30 < th dose independent rect. 23 23
191 38.36 precipitation 0.1 1440 < th dose independent rect. 23 1
192 38.36 precipitation 0.1 1440 < th dose dependent rect. 23 1
201 38.74 humidity 50.0 30 > th dose independent rect. 23 23
244 39.72 radiation 10.0 30 < th dose dependent rect. 23 23
255 39.82 wind 9.0 30 < th dose dependent rect. 23 23
292 39.96 temperature 10.0 30 > th dose dependent rect. 23 23
345 40.17 atmosphere 1005.0 30 > th dose dependent rect. 17 6
353 40.24 radiation 1.0 30 < th dose independent rect. 23 23
363 40.27 temperature 10.0 1440 > th dose independent rect. 24 7
366 40.27 temperature 30.0 1440 < th dose independent rect. 24 7
370 40.27 humidity 50.0 1440 > th dose independent rect. 24 7
375 40.27 atmosphere 995.0 1440 > th dose independent rect. 24 7
376 40.27 radiation 40.0 1440 < th dose independent rect. 24 7
380 40.27 temperature 10.0 1440 > th dose independent rect. 7 17
390 40.30 precipitation 0.1 30 < th dose independent rect. 6 17
392 40.30 precipitation 0.1 30 < th dose dependent rect. 6 17
397 40.33 wind 1.0 30 > th dose independent rect. 6 17
400 40.34 radiation 30.0 30 < th dose dependent rect. 23 7
403 40.35 temperature 10.0 30 > th dose dependent rect. 23 7
405 40.36 wind 9.0 30 < th dose independent rect. 23 7
406 40.36 temperature 10.0 30 > th dose independent rect. 23 7
407 40.36 temperature 30.0 30 < th dose independent rect. 23 7
408 40.36 humidity 50.0 30 > th dose independent rect. 23 7
411 40.36 atmosphere 995.0 30 > th dose independent rect. 23 7
412 40.36 radiation 20.0 30 < th dose independent rect. 23 7
415 40.36 temperature 10.0 30 > th dose independent rect. 6 17
417 40.36 atmosphere 1015.0 30 < th dose independent rect. 6 17
422 40.38 radiation 10.0 30 < th dose dependent rect. 23 11
426 40.39 radiation 10.0 30 < th dose dependent rect. 23 9
428 40.40 precipitation 0.1 30 < th dose independent rect. 23 7
431 40.40 precipitation 0.1 30 < th dose dependent rect. 23 7
449 40.47 wind 9.0 30 < th dose independent rect. 6 17
453 40.48 radiation 1.0 90 < th dose independent rect. 23 9
465 40.50 temperature 10.0 1440 > th dose independent rect. 21 3
468 40.50 temperature 30.0 1440 < th dose independent rect. 21 3
472 40.50 humidity 50.0 1440 > th dose independent rect. 21 3
478 40.50 atmosphere 995.0 1440 > th dose independent rect. 21 3
479 40.50 radiation 1.0 1440 < th dose independent rect. 21 3
500 40.50 temperature 10.0 1440 > th dose independent rect. 24 21
504 40.50 radiation 10.0 1440 < th dose dependent rect. 21 3
511 40.50 radiation 40.0 43200 < th dose dependent rect. 21 3
522 40.51 radiation 1.0 90 < th dose dependent rect. 23 20
551 40.53 humidity 50.0 30 > th dose dependent rect. 23 7
555 40.54 wind 9.0 720 < th dose independent rect. 3 8
556 40.54 temperature 15.0 720 > th dose independent rect. 11 16
563 40.55 temperature 10.0 720 > th dose independent rect. 3 8
564 40.55 atmosphere 995.0 720 > th dose independent rect. 3 8
565 40.55 atmosphere 1015.0 720 < th dose independent rect. 3 8
573 40.56 radiation 40.0 720 < th dose independent rect. 15 8
631 40.57 wind 9.0 30 < th dose dependent rect. 23 7
641 40.58 temperature 10.0 720 > th dose independent rect. 15 8
643 40.58 temperature 10.0 720 > th dose independent rect. 23 16
703 40.61 wind 9.0 720 < th dose independent rect. 23 12
740 40.64 temperature 10.0 720 > th dose independent rect. 11 12
741 40.64 temperature 10.0 720 > th dose independent rect. 23 12
742 40.64 atmosphere 995.0 720 > th dose independent rect. 23 12
744 40.64 radiation 1.0 90 < th dose independent rect. 23 20
752 40.64 radiation 40.0 30 < th dose dependent rect. 23 12
771 40.65 wind 9.0 720 < th dose independent rect. 23 16
773 40.65 humidity 90.0 30 < th dose independent rect. 6 17
788 40.67 humidity 50.0 720 > th dose independent rect. 23 12
797 40.68 atmosphere 995.0 30 > th dose independent rect. 6 17
808 40.70 atmosphere 1015.0 30 < th dose independent rect. 23 7
809 40.70 precipitation 0.1 720 < th dose independent rect. 11 12
815 40.70 precipitation 0.1 720 < th dose dependent rect. 11 12
817 40.71 temperature 30.0 14400 > th dose independent rect. 17 1
820 40.71 radiation 1.0 90 < th dose independent rect. 23 18
844 40.73 temperature 30.0 14400 < th dose independent rect. 17 7
857 40.73 temperature 30.0 14400 > th dose dependent rect. 17 1
861 40.74 temperature 30.0 14400 < th dose independent rect. 17 1
885 40.74 radiation 1.0 90 < th dose dependent rect. 23 18
886 40.74 radiation 40.0 30 < th dose dependent rect. 23 23
980 40.77 atmosphere 995.0 90 > th dose dependent rect. 23 6