Os11g0592900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Thioredoxin domain 2 containing protein.
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Os11g0592900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Thioredoxin domain 2 containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.38 | 0.454 | 10.7 | 0.99 | 0.145 | -0.698 | 0.327 | 2.45 | 0.217 | 21.4 | 20.6 | 5878 | -- | -- |
| 102.04 | 0.47 | 10.8 | 0.729 | 0.148 | -0.832 | 0.304 | -- | 0.17 | 21.8 | 10.72 | 40844 | -- | -- |
| 93.35 | 0.45 | 10.7 | 1.15 | 0.157 | -0.754 | -- | 3.36 | 0.235 | 20.8 | 23.33 | 5910 | -- | -- |
| 98.53 | 0.462 | 10.8 | 0.328 | 0.204 | -0.692 | -- | -- | 0.0169 | 21.1 | 19.28 | 5731 | -- | -- |
| 94.51 | 0.453 | 10.7 | 1.19 | -- | -0.761 | -- | 3.42 | 0.238 | -- | 23.2 | 5906 | -- | -- |
| 110 | 0.492 | 10.8 | -0.0685 | 0.142 | -- | 0.277 | -- | -0.161 | 21.1 | -- | -- | -- | -- |
| 110.26 | 0.492 | 10.8 | -0.0781 | 0.141 | -- | -- | -- | -0.161 | 21 | -- | -- | -- | -- |
| 98.26 | 0.462 | 10.8 | 0.351 | -- | -0.89 | -- | -- | 0.0278 | -- | 12.03 | 5861 | -- | -- |
| 99.38 | 0.464 | 10.8 | -- | 0.147 | -0.628 | -- | -- | -0.0392 | 21.6 | 15.96 | 5796 | -- | -- |
| 111.41 | 0.493 | 10.8 | -0.0779 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 110.43 | 0.492 | 10.8 | -- | 0.142 | -- | -- | -- | -0.152 | 21 | -- | -- | -- | -- |
| 100.61 | 0.467 | 10.8 | -- | -- | -0.692 | -- | -- | -0.0383 | -- | 9.612 | 5822 | -- | -- |
| 111.57 | 0.493 | 10.8 | -- | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.67 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 2 | 86.67 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 3 | 87.26 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 5 | 87.26 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 7 | 88.52 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 8 | 88.57 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 9 | 88.60 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 11 | 89.10 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 13 | 90.68 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 3 |
| 21 | 92.08 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 27 | 92.53 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 29 | 92.55 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 30 | 92.63 | temperature | 20.0 | 720 | < th | dose independent | rect. | 1 | 6 |
| 31 | 92.64 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 5 |
| 32 | 92.67 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 4 |
| 37 | 92.97 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 40 | 92.98 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 42 | 93.05 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 72 | 93.39 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 73 | 93.40 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 8 |
| 74 | 93.41 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 77 | 93.41 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 12 |
| 78 | 93.41 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 14 |
| 91 | 93.51 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 7 |
| 94 | 93.56 | radiation | 10.0 | 90 | < th | dose independent | rect. | 11 | 1 |
| 103 | 93.69 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 10 |
| 104 | 93.69 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 12 |
| 105 | 93.70 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 8 |
| 108 | 93.70 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 14 |
| 109 | 93.70 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 16 |
| 125 | 93.83 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 126 | 93.85 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 128 | 93.86 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 131 | 93.86 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 134 | 93.86 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 135 | 93.87 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 148 | 93.88 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 192 | 93.99 | temperature | 20.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 202 | 94.10 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 217 | 94.21 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 14 |
| 235 | 94.29 | temperature | 25.0 | 90 | < th | dose independent | rect. | 6 | 7 |
| 236 | 94.29 | temperature | 25.0 | 720 | < th | dose dependent | sin | 8 | NA |
| 251 | 94.41 | temperature | 20.0 | 720 | > th | dose independent | sin | 7 | NA |
| 276 | 94.49 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 12 | 18 |
| 277 | 94.50 | temperature | 30.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 282 | 94.50 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 291 | 94.54 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 1 | 15 |
| 304 | 94.56 | temperature | 20.0 | 720 | < th | dose independent | sin | 7 | NA |
| 326 | 94.59 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 335 | 94.60 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 21 | 19 |
| 346 | 94.63 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 3 | 2 |
| 351 | 94.64 | temperature | 30.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 381 | 94.66 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 8 | 22 |
| 443 | 94.71 | temperature | 20.0 | 4320 | > th | dose dependent | no | NA | NA |
| 468 | 94.73 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 469 | 94.73 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 503 | 94.76 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 12 | 11 |
| 527 | 94.78 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 548 | 94.81 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 746 | 95.00 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 753 | 95.00 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 814 | 95.05 | temperature | 20.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 831 | 95.06 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 842 | 95.07 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 8 | 8 |
| 979 | 95.17 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |