Os11g0592500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein phosphatase 2C-like domain containing protein.
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Os11g0592500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein phosphatase 2C-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.36 | 0.291 | 8.99 | -0.588 | 0.642 | -0.788 | -0.223 | -0.914 | -1.39 | 6.82 | 29.5 | 10 | -- | -- |
| 39.44 | 0.295 | 9.01 | -0.741 | 0.632 | -0.791 | -0.257 | -- | -1.43 | 6.79 | 29.5 | 10 | -- | -- |
| 38.31 | 0.29 | 8.99 | -0.587 | 0.638 | -0.795 | -- | -0.945 | -1.39 | 6.8 | 29.5 | 10 | -- | -- |
| 39.61 | 0.295 | 9.01 | -0.744 | 0.631 | -0.785 | -- | -- | -1.43 | 6.85 | 29.5 | 10 | -- | -- |
| 57.5 | 0.355 | 9 | -0.549 | -- | -0.811 | -- | -1.2 | -1.35 | -- | 24.2 | 10 | -- | -- |
| 48.12 | 0.325 | 8.98 | -0.554 | 0.598 | -- | -0.0624 | -- | -1.27 | 8.48 | -- | -- | -- | -- |
| 48.13 | 0.325 | 8.98 | -0.556 | 0.598 | -- | -- | -- | -1.27 | 8.5 | -- | -- | -- | -- |
| 59.91 | 0.362 | 9.02 | -0.71 | -- | -0.693 | -- | -- | -1.4 | -- | 24.8 | 7 | -- | -- |
| 52.72 | 0.34 | 8.98 | -- | 0.606 | -0.586 | -- | -- | -1.28 | 7.53 | 54.72 | 10 | -- | -- |
| 68.17 | 0.386 | 8.99 | -0.554 | -- | -- | -- | -- | -1.27 | -- | -- | -- | -- | -- |
| 56.28 | 0.351 | 8.96 | -- | 0.596 | -- | -- | -- | -1.21 | 8.57 | -- | -- | -- | -- |
| 71.95 | 0.396 | 8.99 | -- | -- | -0.445 | -- | -- | -1.28 | -- | 28.3 | 3 | -- | -- |
| 76.25 | 0.408 | 8.98 | -- | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.28 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 3 | 37.70 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 4 | 37.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 6 | 37.80 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 11 | 37.85 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 13 | 37.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 7 |
| 16 | 37.95 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 22 | 38.00 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 47 | 38.16 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 10 |
| 50 | 38.19 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 52 | 38.20 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 12 |
| 55 | 38.21 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 73 | 38.29 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 77 | 38.30 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 83 | 38.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 84 | 38.32 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 88 | 38.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 90 | 38.34 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 95 | 38.35 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 105 | 38.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 110 | 38.39 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 117 | 38.40 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 120 | 38.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 130 | 38.42 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 136 | 38.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 198 | 38.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 200 | 38.58 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 207 | 38.59 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 213 | 38.60 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 221 | 38.62 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 235 | 38.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 243 | 38.67 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 248 | 38.67 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 259 | 38.70 | temperature | 25 | 4320 | < th | dose independent | sin | 12 | NA |
| 272 | 38.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 279 | 38.74 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 298 | 38.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 329 | 38.82 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 338 | 38.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 339 | 38.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 343 | 38.83 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 358 | 38.85 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 359 | 38.85 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 362 | 38.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 14 |
| 370 | 38.86 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 377 | 38.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 11 |
| 388 | 38.89 | temperature | 25 | 4320 | > th | dose independent | sin | 12 | NA |
| 392 | 38.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 9 |
| 400 | 38.90 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 408 | 38.91 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 453 | 38.96 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 488 | 38.98 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 9 |
| 509 | 39.00 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 510 | 39.00 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 533 | 39.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 675 | 39.12 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 701 | 39.14 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 977 | 39.29 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 995 | 39.30 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |