Os11g0592400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CRS1/YhbY domain containing protein.
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Os11g0592400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CRS1/YhbY domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.68 | 0.273 | 13.1 | -0.197 | 0.881 | -0.879 | -0.182 | 0.272 | -0.34 | 19.6 | 11.31 | 206 | -- | -- |
| 33.97 | 0.271 | 13.1 | -0.205 | 0.893 | -0.846 | -0.119 | -- | -0.347 | 19.4 | 11.47 | 196 | -- | -- |
| 33.67 | 0.27 | 13.1 | -0.195 | 0.924 | -0.853 | -- | 0.244 | -0.343 | 19.5 | 11.78 | 183 | -- | -- |
| 33.97 | 0.271 | 13.1 | -0.193 | 0.922 | -0.841 | -- | -- | -0.34 | 19.4 | 11.5 | 183 | -- | -- |
| 39.26 | 0.292 | 13.1 | -0.222 | -- | -1.42 | -- | 0.376 | -0.396 | -- | 5.182 | 582 | -- | -- |
| 41.77 | 0.303 | 13.1 | -0.167 | 1.31 | -- | -0.224 | -- | -0.306 | 16.4 | -- | -- | -- | -- |
| 41.91 | 0.303 | 13.1 | -0.169 | 1.31 | -- | -- | -- | -0.307 | 16.4 | -- | -- | -- | -- |
| 39.31 | 0.292 | 13.1 | -0.229 | -- | -1.41 | -- | -- | -0.387 | -- | 4.59 | 574 | -- | -- |
| 34.9 | 0.275 | 13.1 | -- | 0.928 | -0.844 | -- | -- | -0.316 | 19.5 | 10.32 | 183 | -- | -- |
| 133.2 | 0.539 | 13.1 | -0.22 | -- | -- | -- | -- | -0.341 | -- | -- | -- | -- | -- |
| 42.66 | 0.306 | 13.1 | -- | 1.31 | -- | -- | -- | -0.288 | 16.4 | -- | -- | -- | -- |
| 40.65 | 0.297 | 13.1 | -- | -- | -1.41 | -- | -- | -0.361 | -- | 5.23 | 572 | -- | -- |
| 134.48 | 0.541 | 13.1 | -- | -- | -- | -- | -- | -0.317 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.86 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 9 | 32.63 | humidity | 70.0 | 90 | > th | dose independent | rect. | 13 | 18 |
| 11 | 32.73 | radiation | 30.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 15 | 32.92 | radiation | 10.0 | 90 | > th | dose independent | sin | 4 | NA |
| 20 | 33.00 | radiation | 10.0 | 270 | > th | dose independent | sin | 11 | NA |
| 21 | 33.02 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 23 | 33.02 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 25 | 33.06 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 26 | 33.07 | radiation | 10.0 | 90 | < th | dose independent | sin | 4 | NA |
| 30 | 33.09 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 13 | 18 |
| 34 | 33.17 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 47 | 33.32 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 48 | 33.33 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 18 |
| 54 | 33.37 | wind | 1.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 59 | 33.40 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 19 |
| 61 | 33.42 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 18 |
| 65 | 33.45 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 16 |
| 79 | 33.54 | radiation | 10.0 | 90 | < th | dose independent | rect. | 13 | 20 |
| 86 | 33.57 | radiation | 10.0 | 90 | > th | dose independent | rect. | 16 | 23 |
| 90 | 33.61 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 20 |
| 94 | 33.63 | radiation | 10.0 | 10 | > th | dose independent | sin | 5 | NA |
| 98 | 33.65 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 100 | 33.66 | radiation | 20.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 118 | 33.73 | temperature | 30.0 | 90 | < th | dose independent | rect. | 13 | 18 |
| 136 | 33.78 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 2 | 5 |
| 140 | 33.80 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 1 | 6 |
| 147 | 33.82 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 6 |
| 153 | 33.85 | radiation | 10.0 | 90 | < th | dose independent | rect. | 19 | 23 |
| 156 | 33.86 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 6 |
| 160 | 33.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 23 |
| 164 | 33.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 167 | 33.89 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 171 | 33.90 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 2 |
| 173 | 33.91 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 7 |
| 190 | 33.94 | radiation | 10.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 207 | 33.97 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 15 | 16 |
| 211 | 33.98 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 213 | 33.99 | radiation | 10.0 | 10 | < th | dose independent | sin | 3 | NA |
| 241 | 34.06 | radiation | 20.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 249 | 34.07 | radiation | 1.0 | 90 | > th | dose independent | rect. | 7 | 12 |
| 271 | 34.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 272 | 34.10 | radiation | 10.0 | 90 | > th | dose independent | rect. | 14 | 23 |
| 275 | 34.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 281 | 34.12 | wind | 7.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 285 | 34.13 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 288 | 34.14 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 14 |
| 298 | 34.17 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 15 | 16 |
| 305 | 34.18 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 21 |
| 312 | 34.19 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 6 |
| 325 | 34.22 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 333 | 34.23 | radiation | 10.0 | 270 | > th | dose independent | rect. | 6 | 4 |
| 350 | 34.24 | radiation | 10.0 | 270 | < th | dose independent | sin | 10 | NA |
| 366 | 34.26 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 367 | 34.26 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 379 | 34.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 13 |
| 383 | 34.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 390 | 34.31 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 393 | 34.31 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 396 | 34.32 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 453 | 34.39 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 477 | 34.42 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 22 |
| 481 | 34.42 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 22 |
| 536 | 34.50 | radiation | 10.0 | 90 | > th | dose independent | no | NA | NA |
| 622 | 34.51 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 636 | 34.53 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 638 | 34.53 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 673 | 34.56 | radiation | 20.0 | 10 | < th | dose independent | rect. | 12 | 20 |
| 676 | 34.56 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 682 | 34.58 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 683 | 34.58 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 685 | 34.58 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 686 | 34.58 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 689 | 34.58 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 693 | 34.58 | radiation | 10.0 | 10 | < th | dose independent | rect. | 2 | 8 |
| 694 | 34.58 | temperature | 30.0 | 90 | < th | dose independent | rect. | 15 | 16 |
| 695 | 34.58 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 764 | 34.63 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 765 | 34.63 | radiation | 10.0 | 90 | < th | dose independent | rect. | 9 | 23 |
| 796 | 34.66 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 800 | 34.66 | temperature | 15.0 | 90 | > th | dose independent | rect. | 13 | 18 |
| 810 | 34.67 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 851 | 34.72 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 853 | 34.72 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 859 | 34.72 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 893 | 34.76 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 915 | 34.78 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 962 | 34.81 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 967 | 34.82 | radiation | 10.0 | 90 | < th | dose independent | no | NA | NA |
| 974 | 34.83 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 19 | 12 |
| 993 | 34.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 11 |