Os11g0592300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 8 protein.
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Os11g0592300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 8 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.68 | 0.462 | 8.52 | 0.384 | 0.107 | 0.805 | -1.32 | -2.12 | -0.0689 | 17.6 | 10.01 | 1433 | -- | -- |
| 104.2 | 0.475 | 8.5 | 0.719 | 0.138 | 0.752 | -1.2 | -- | -0.00653 | 17.8 | 10 | 1469 | -- | -- |
| 100.36 | 0.467 | 8.53 | 0.369 | 0.136 | 0.779 | -- | -2.15 | -0.0615 | 14.7 | 10.06 | 1400 | -- | -- |
| 107.07 | 0.482 | 8.49 | 0.65 | 0.194 | 0.81 | -- | -- | -0.066 | 14 | 10.01 | 1428 | -- | -- |
| 101.51 | 0.469 | 8.52 | 0.388 | -- | 0.816 | -- | -2.1 | -0.0754 | -- | 10.01 | 1430 | -- | -- |
| 120.06 | 0.514 | 8.41 | 0.961 | 0.102 | -- | -1.37 | -- | 0.29 | 17.5 | -- | -- | -- | -- |
| 123.93 | 0.521 | 8.41 | 0.968 | 0.144 | -- | -- | -- | 0.285 | 14.1 | -- | -- | -- | -- |
| 107.92 | 0.484 | 8.48 | 0.723 | -- | 0.83 | -- | -- | 0.0349 | -- | 10 | 1499 | -- | -- |
| 118.57 | 0.507 | 8.49 | -- | 0.186 | 0.979 | -- | -- | -0.0721 | 13.9 | 10 | 1428 | -- | -- |
| 125.17 | 0.523 | 8.42 | 0.962 | -- | -- | -- | -- | 0.282 | -- | -- | -- | -- | -- |
| 148.63 | 0.57 | 8.44 | -- | 0.126 | -- | -- | -- | 0.178 | 13.9 | -- | -- | -- | -- |
| 120.53 | 0.511 | 8.51 | -- | -- | 1.02 | -- | -- | -0.0839 | -- | 10 | 1491 | -- | -- |
| 149.58 | 0.571 | 8.44 | -- | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.72 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 86.72 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 91.23 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 4 | 91.24 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 6 | 91.52 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 9 | 91.78 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 10 | 91.78 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 11 | 91.82 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 14 | 91.99 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 33 | 92.57 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 34 | 92.58 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 37 | 92.67 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 39 | 92.67 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 45 | 92.77 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 95 | 94.87 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 103 | 94.90 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 122 | 95.32 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 124 | 95.33 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 126 | 95.33 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 128 | 95.33 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 179 | 95.33 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 181 | 95.33 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 183 | 95.33 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 251 | 95.50 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 255 | 95.55 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 10 |
| 257 | 95.56 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 24 | 13 |
| 265 | 95.63 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 293 | 95.83 | radiation | 10.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 343 | 96.07 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 344 | 96.08 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 399 | 96.34 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 408 | 96.41 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 416 | 96.60 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 420 | 96.65 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 463 | 96.75 | radiation | 10.0 | 1440 | > th | dose independent | no | NA | NA |
| 538 | 96.84 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 655 | 97.58 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 674 | 97.77 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 10 |
| 676 | 97.78 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 699 | 97.88 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 717 | 97.95 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 743 | 98.15 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 748 | 98.19 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 749 | 98.20 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 753 | 98.24 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 770 | 98.44 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 795 | 98.49 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 18 | 6 |
| 798 | 98.50 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 802 | 98.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 806 | 98.53 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 815 | 98.58 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 834 | 98.62 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |