Os11g0591400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0591400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.37 | 0.555 | 3.6 | 0.891 | 0.919 | -0.379 | 0.675 | -0.288 | 0.592 | 5.02 | 25 | 4 | -- | -- |
| 139.42 | 0.554 | 3.6 | 0.813 | 0.916 | -0.386 | 0.536 | -- | 0.566 | 5.03 | 25 | 4 | -- | -- |
| 140.07 | 0.555 | 3.6 | 0.852 | 0.915 | -0.375 | -- | -0.129 | 0.579 | 5.06 | 25 | 4 | -- | -- |
| 140.15 | 0.555 | 3.61 | 0.813 | 0.916 | -0.38 | -- | -- | 0.567 | 5.05 | 25 | 4 | -- | -- |
| 173.9 | 0.618 | 3.59 | 0.861 | -- | -0.24 | -- | -0.137 | 0.7 | -- | 23.3 | 5 | -- | -- |
| 149.9 | 0.574 | 3.56 | 0.892 | 0.735 | -- | 0.406 | -- | 0.768 | 5.79 | -- | -- | -- | -- |
| 150.3 | 0.574 | 3.56 | 0.895 | 0.738 | -- | -- | -- | 0.766 | 5.8 | -- | -- | -- | -- |
| 174.01 | 0.617 | 3.59 | 0.817 | -- | -0.242 | -- | -- | 0.687 | -- | 23.3 | 5 | -- | -- |
| 157.06 | 0.584 | 3.63 | -- | 0.97 | -0.443 | -- | -- | 0.455 | 4.98 | 24.8 | 5 | -- | -- |
| 178.53 | 0.624 | 3.57 | 0.918 | -- | -- | -- | -- | 0.783 | -- | -- | -- | -- | -- |
| 171.42 | 0.612 | 3.58 | -- | 0.752 | -- | -- | -- | 0.666 | 5.75 | -- | -- | -- | -- |
| 190.64 | 0.645 | 3.62 | -- | -- | -0.352 | -- | -- | 0.557 | -- | 23.3 | 5 | -- | -- |
| 200.75 | 0.661 | 3.6 | -- | -- | -- | -- | -- | 0.682 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.86 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 5 | 137.29 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 22 |
| 7 | 137.55 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 11 |
| 9 | 137.80 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 10 | 137.89 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 21 |
| 18 | 138.06 | temperature | 25.0 | 10 | < th | dose independent | rect. | 18 | 20 |
| 29 | 138.23 | temperature | 25.0 | 10 | < th | dose independent | sin | 6 | NA |
| 31 | 138.27 | temperature | 25.0 | 10 | < th | dose independent | rect. | 22 | 16 |
| 32 | 138.29 | temperature | 10.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 40 | 138.34 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 14 | 22 |
| 43 | 138.37 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 16 |
| 49 | 138.40 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 7 |
| 57 | 138.47 | temperature | 30.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 66 | 138.49 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 11 |
| 109 | 138.70 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 130 | 138.82 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 2 |
| 138 | 138.85 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 168 | 138.98 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 186 | 139.05 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 204 | 139.11 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 205 | 139.11 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 235 | 139.19 | temperature | 25.0 | 10 | > th | dose independent | sin | 6 | NA |
| 242 | 139.20 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 20 |
| 413 | 139.66 | temperature | 25.0 | 10 | < th | dose independent | rect. | 22 | 22 |
| 501 | 139.78 | temperature | 25.0 | 30 | < th | dose dependent | sin | 4 | NA |
| 567 | 139.87 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 15 |
| 577 | 139.89 | temperature | 25.0 | 10 | < th | dose independent | rect. | 5 | 23 |
| 615 | 139.94 | temperature | 20.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 628 | 139.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 644 | 139.97 | temperature | 25.0 | 10 | < th | dose independent | no | NA | NA |
| 653 | 139.98 | temperature | 25.0 | 10 | < th | dose independent | rect. | 9 | 23 |
| 654 | 139.98 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 672 | 140.00 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 673 | 140.00 | temperature | 30.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 693 | 140.03 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 706 | 140.05 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 17 |
| 745 | 140.08 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 18 |
| 827 | 140.16 | temperature | 25.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 835 | 140.17 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 854 | 140.19 | temperature | 25.0 | 10 | > th | dose independent | rect. | 19 | 23 |
| 930 | 140.27 | temperature | 25.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 957 | 140.29 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 22 | 16 |
| 961 | 140.30 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 981 | 140.32 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 992 | 140.33 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 4 |