Os11g0591000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0591000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.47 | 0.578 | 3.76 | -0.652 | 0.56 | 1.46 | 0.0737 | -1.76 | -0.429 | 6.7 | 21.62 | 1242 | -- | -- |
| 152.98 | 0.576 | 3.7 | -0.203 | 0.577 | 1.48 | 0.0952 | -- | -0.315 | 6.82 | 19.13 | 1200 | -- | -- |
| 151.4 | 0.573 | 3.76 | -0.689 | 0.551 | 1.45 | -- | -1.96 | -0.424 | 6.63 | 22.28 | 1271 | -- | -- |
| 153.01 | 0.576 | 3.7 | -0.202 | 0.577 | 1.48 | -- | -- | -0.314 | 6.83 | 19.13 | 1199 | -- | -- |
| 166.77 | 0.601 | 3.77 | -0.714 | -- | 1.48 | -- | -2.01 | -0.426 | -- | 22.57 | 1305 | -- | -- |
| 209.61 | 0.679 | 3.63 | 0.309 | 0.63 | -- | 0.474 | -- | 0.011 | 5.3 | -- | -- | -- | -- |
| 210.13 | 0.679 | 3.63 | 0.31 | 0.634 | -- | -- | -- | 0.00904 | 5.44 | -- | -- | -- | -- |
| 168.63 | 0.605 | 3.71 | -0.195 | -- | 1.46 | -- | -- | -0.311 | -- | 19.67 | 1306 | -- | -- |
| 153.85 | 0.578 | 3.69 | -- | 0.579 | 1.4 | -- | -- | -0.279 | 6.84 | 19.82 | 1190 | -- | -- |
| 231.06 | 0.71 | 3.64 | 0.331 | -- | -- | -- | -- | 0.0246 | -- | -- | -- | -- | -- |
| 212.66 | 0.682 | 3.64 | -- | 0.639 | -- | -- | -- | -0.0255 | 5.42 | -- | -- | -- | -- |
| 169.45 | 0.606 | 3.71 | -- | -- | 1.37 | -- | -- | -0.274 | -- | 20.27 | 1304 | -- | -- |
| 233.95 | 0.714 | 3.65 | -- | -- | -- | -- | -- | -0.0121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 10 |
| 6 | 152.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 20 |
| 20 | 152.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 22 |
| 28 | 152.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 54 | 152.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 55 | 152.68 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 59 | 152.69 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 229 | 153.18 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 254 | 153.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 289 | 153.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 298 | 153.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 13 |
| 333 | 153.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 588 | 154.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 615 | 154.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |