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Os11g0590900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Disease resistance protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.6 (0.0301) R2 : 0.647
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.95 (0.0738) R2dC : 0.554 R2C : 0.497
β3 : -1.04 (0.0954) R2dE : 0.11 R2E : 0.00478
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.632 (0.0671) R2dN8 : 0.109 R2N8 : 0.013
σ : 0.555
deviance : 141.98
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_____
C
peak time of C : 9.02
E
wheather : radiation
threshold : 11.41
memory length : 1418
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
126.72 0.529 7.61 0.568 1.96 -0.917 0.585 1.24 -0.596 8.96 17.08 1408 -- --
130.11 0.531 7.59 0.693 1.97 -0.914 0.645 -- -0.563 8.99 17.07 1401 -- --
127.76 0.526 7.61 0.574 1.99 -0.93 -- 1.34 -0.609 8.99 16.64 1376 -- --
131.56 0.534 7.6 0.703 1.97 -0.883 -- -- -0.561 9.02 17.08 1401 -- --
324.15 0.843 7.58 0.858 -- -0.729 -- 0.154 -0.255 -- 16.64 1376 -- --
160.13 0.593 7.54 0.851 1.92 -- 0.584 -- -0.309 8.82 -- -- -- --
161.27 0.595 7.54 0.87 1.91 -- -- -- -0.309 8.83 -- -- -- --
324.28 0.842 7.58 0.849 -- -0.726 -- -- -0.256 -- 16.64 1376 -- --
141.98 0.555 7.6 -- 1.95 -1.04 -- -- -0.632 9.02 11.41 1418 -- --
369.83 0.899 7.59 0.872 -- -- -- -- -0.294 -- -- -- -- --
181.24 0.63 7.56 -- 1.92 -- -- -- -0.406 8.8 -- -- -- --
329.84 0.849 7.61 -- -- -0.774 -- -- -0.361 -- 10.04 1605 -- --
389.86 0.922 7.61 -- -- -- -- -- -0.391 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 124.87 radiation 20 1440 < th dose dependent rect. 11 2
2 125.22 radiation 20 1440 < th dose dependent rect. 11 5
3 125.72 radiation 20 1440 < th dose independent rect. 11 5
5 125.76 radiation 20 1440 < th dose dependent rect. 8 8
11 126.50 radiation 10 1440 < th dose independent rect. 13 3
12 126.51 radiation 20 1440 < th dose independent rect. 11 22
25 127.12 radiation 20 1440 < th dose independent rect. 11 14
27 127.13 radiation 20 1440 < th dose independent rect. 11 16
32 127.14 radiation 20 1440 < th dose dependent sin 22 NA
35 127.16 radiation 20 1440 < th dose independent rect. 11 12
37 127.16 radiation 20 1440 < th dose dependent rect. 8 17
38 127.16 radiation 20 1440 < th dose dependent rect. 8 19
41 127.17 radiation 20 1440 < th dose independent rect. 11 10
48 127.19 radiation 20 1440 < th dose dependent rect. 8 15
50 127.20 radiation 20 1440 < th dose dependent rect. 8 13
55 127.24 radiation 20 1440 < th dose independent rect. 14 1
75 127.52 radiation 20 1440 < th dose independent rect. 11 2
76 127.54 radiation 20 1440 < th dose dependent rect. 11 22
78 127.63 radiation 20 1440 < th dose independent rect. 8 8
92 127.89 radiation 20 1440 < th dose dependent rect. 20 20
93 127.90 radiation 20 1440 < th dose dependent rect. 24 16
94 127.90 radiation 20 1440 < th dose dependent rect. 22 18
102 127.93 radiation 20 1440 < th dose dependent rect. 2 14
112 128.03 radiation 20 1440 < th dose dependent rect. 11 14
113 128.03 radiation 20 1440 < th dose dependent rect. 11 16
114 128.03 radiation 20 1440 < th dose dependent rect. 11 19
119 128.08 radiation 20 1440 < th dose dependent rect. 11 12
122 128.09 radiation 20 1440 < th dose dependent rect. 11 10
125 128.10 radiation 20 1440 < th dose independent rect. 20 20
126 128.11 radiation 20 1440 < th dose independent rect. 24 16
127 128.11 radiation 20 1440 < th dose independent rect. 22 18
136 128.13 radiation 20 1440 < th dose independent rect. 2 14
142 128.15 radiation 20 1440 < th dose independent sin 22 NA
151 128.24 radiation 20 1440 < th dose independent rect. 8 17
152 128.24 radiation 20 1440 < th dose independent rect. 8 19
160 128.26 radiation 20 1440 < th dose independent rect. 8 15
169 128.27 radiation 20 1440 < th dose independent rect. 8 13
205 128.38 radiation 30 1440 < th dose dependent rect. 14 1
322 128.74 radiation 20 1440 < th dose independent rect. 2 23
326 128.75 radiation 20 1440 < th dose independent no NA NA
335 128.75 radiation 20 1440 < th dose independent rect. 24 21
341 128.75 radiation 20 1440 < th dose independent rect. 22 23
356 128.76 radiation 20 1440 < th dose independent rect. 2 19
409 128.82 radiation 10 1440 > th dose independent rect. 17 22
440 128.92 radiation 20 1440 < th dose dependent rect. 2 23
443 128.93 radiation 20 1440 < th dose dependent no NA NA
445 128.93 radiation 20 1440 < th dose dependent rect. 24 21
449 128.93 radiation 20 1440 < th dose dependent rect. 22 23
464 128.95 radiation 20 1440 < th dose dependent rect. 2 19
496 128.99 radiation 10 1440 > th dose independent rect. 7 8
517 129.08 radiation 10 1440 > th dose independent rect. 11 22
595 129.37 radiation 20 1440 < th dose independent rect. 14 23
800 129.78 radiation 10 1440 > th dose independent sin 1 NA
899 130.08 radiation 20 1440 < th dose dependent rect. 14 23
969 130.37 radiation 10 1440 > th dose independent no NA NA