Os11g0587100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os11g0587100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 225.68 | 0.706 | 3.07 | -0.146 | 0.229 | 0.387 | -0.177 | -0.0243 | -0.406 | 3.2 | 25.05 | 245 | -- | -- |
| 225.67 | 0.7 | 3.07 | -0.139 | 0.228 | 0.384 | -0.164 | -- | -0.404 | 3.15 | 25.06 | 241 | -- | -- |
| 225.41 | 0.699 | 3.05 | -0.0748 | 0.197 | 0.36 | -- | 0.188 | -0.366 | 1.72 | 24.5 | 166 | -- | -- |
| 225.24 | 0.699 | 3.07 | -0.12 | 0.208 | 0.369 | -- | -- | -0.405 | 1.72 | 24.6 | 153 | -- | -- |
| 227.1 | 0.702 | 3.06 | -0.102 | -- | 0.316 | -- | 0.109 | -0.366 | -- | 24.6 | 271 | -- | -- |
| 232.75 | 0.715 | 3.03 | -0.0138 | 0.119 | -- | 0.386 | -- | -0.217 | 19.2 | -- | -- | -- | -- |
| 233.05 | 0.715 | 3.03 | -0.0236 | 0.124 | -- | -- | -- | -0.217 | 20.5 | -- | -- | -- | -- |
| 227.08 | 0.702 | 3.06 | -0.124 | -- | 0.314 | -- | -- | -0.373 | -- | 24.6 | 276 | -- | -- |
| 225.7 | 0.7 | 3.07 | -- | 0.194 | 0.349 | -- | -- | -0.394 | 1.64 | 24.6 | 153 | -- | -- |
| 233.91 | 0.715 | 3.03 | -0.0241 | -- | -- | -- | -- | -0.218 | -- | -- | -- | -- | -- |
| 233.06 | 0.714 | 3.03 | -- | 0.124 | -- | -- | -- | -0.215 | 20.5 | -- | -- | -- | -- |
| 227.45 | 0.702 | 3.06 | -- | -- | 0.298 | -- | -- | -0.353 | -- | 24.54 | 276 | -- | -- |
| 233.92 | 0.714 | 3.03 | -- | -- | -- | -- | -- | -0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 210.07 | wind | 3 | 90 | < th | dose independent | rect. | 16 | 2 |
| 2 | 210.18 | wind | 3 | 10 | < th | dose independent | rect. | 16 | 3 |
| 5 | 211.27 | wind | 3 | 90 | < th | dose dependent | rect. | 16 | 2 |
| 26 | 214.66 | humidity | 80 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 56 | 217.13 | atmosphere | 1005 | 30 | < th | dose independent | rect. | 7 | 2 |
| 80 | 218.05 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 7 | 2 |
| 95 | 218.65 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 2 |
| 100 | 218.76 | humidity | 90 | 90 | > th | dose independent | rect. | 16 | 2 |
| 146 | 219.38 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 2 |
| 147 | 219.39 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 1 |
| 212 | 219.72 | wind | 5 | 270 | < th | dose independent | rect. | 13 | 19 |
| 248 | 220.42 | wind | 7 | 90 | < th | dose dependent | rect. | 16 | 18 |
| 257 | 220.59 | wind | 9 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 261 | 220.72 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 285 | 221.28 | radiation | 1 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 299 | 221.49 | wind | 5 | 90 | < th | dose independent | rect. | 16 | 17 |
| 313 | 221.61 | wind | 9 | 90 | < th | dose dependent | rect. | 24 | 18 |
| 317 | 221.66 | wind | 5 | 90 | < th | dose independent | rect. | 24 | 18 |
| 324 | 221.73 | radiation | 20 | 10 | > th | dose independent | rect. | 7 | 1 |
| 341 | 221.74 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 3 | 5 |
| 370 | 221.88 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 411 | 222.13 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 1 |
| 431 | 222.31 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 21 |
| 434 | 222.33 | radiation | 20 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 440 | 222.37 | radiation | 20 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 475 | 222.49 | temperature | 25 | 30 | > th | dose independent | rect. | 7 | 1 |
| 478 | 222.50 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 24 | 9 |
| 482 | 222.51 | temperature | 25 | 90 | > th | dose independent | rect. | 14 | 20 |
| 484 | 222.52 | radiation | 10 | 10 | < th | dose independent | rect. | 8 | 1 |
| 489 | 222.56 | radiation | 30 | 90 | > th | dose independent | rect. | 7 | 1 |
| 554 | 222.68 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 3 | 5 |
| 562 | 222.73 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 567 | 222.76 | temperature | 20 | 90 | < th | dose dependent | rect. | 12 | 6 |
| 595 | 222.87 | wind | 9 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 623 | 223.01 | humidity | 90 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 640 | 223.03 | temperature | 25 | 90 | < th | dose independent | rect. | 18 | 22 |
| 681 | 223.14 | humidity | 90 | 30 | < th | dose independent | rect. | 7 | 1 |
| 686 | 223.16 | radiation | 30 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 710 | 223.27 | wind | 7 | 720 | < th | dose independent | rect. | 6 | 12 |
| 713 | 223.27 | temperature | 25 | 270 | < th | dose independent | rect. | 18 | 19 |
| 715 | 223.28 | humidity | 80 | 720 | > th | dose independent | rect. | 2 | 4 |
| 746 | 223.38 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 2 | 11 |
| 766 | 223.40 | temperature | 25 | 90 | < th | dose independent | rect. | 18 | 6 |
| 767 | 223.40 | temperature | 20 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 787 | 223.46 | humidity | 50 | 270 | > th | dose independent | rect. | 13 | 14 |
| 830 | 223.57 | humidity | 50 | 270 | > th | dose independent | rect. | 8 | 14 |
| 833 | 223.59 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 855 | 223.62 | temperature | 25 | 270 | < th | dose independent | rect. | 19 | 2 |
| 861 | 223.64 | temperature | 25 | 90 | > th | dose independent | rect. | 2 | 6 |
| 865 | 223.66 | wind | 5 | 90 | < th | dose independent | rect. | 24 | 10 |
| 888 | 223.70 | wind | 7 | 270 | < th | dose independent | rect. | 13 | 13 |
| 917 | 223.79 | temperature | 30 | 270 | < th | dose independent | rect. | 13 | 13 |
| 933 | 223.82 | wind | 3 | 90 | < th | dose independent | rect. | 24 | 23 |
| 984 | 223.97 | temperature | 25 | 90 | > th | dose independent | rect. | 2 | 21 |
| 998 | 223.99 | wind | 9 | 90 | < th | dose dependent | rect. | 24 | 10 |