Os11g0585200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0585200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.76 | 0.214 | 11.9 | 0.415 | 0.59 | -0.492 | -0.668 | -0.283 | -0.432 | 20.4 | 1010 | 22485 | -- | -- |
| 20.81 | 0.212 | 11.9 | 0.498 | 0.598 | -0.514 | -0.708 | -- | -0.415 | 20.5 | 1009 | 22497 | -- | -- |
| 22.09 | 0.219 | 11.9 | 0.464 | 0.593 | -0.529 | -- | -0.219 | -0.428 | 20.5 | 1009 | 22017 | -- | -- |
| 21.95 | 0.218 | 11.9 | 0.531 | 0.594 | -0.564 | -- | -- | -0.405 | 20.5 | 1009 | 22557 | -- | -- |
| 41.38 | 0.3 | 11.9 | 0.489 | -- | -0.549 | -- | -0.177 | -0.428 | -- | 1009 | 22739 | -- | -- |
| 27.1 | 0.244 | 11.9 | 0.302 | 0.59 | -- | -0.689 | -- | -0.482 | 20.4 | -- | -- | -- | -- |
| 28.59 | 0.25 | 11.9 | 0.323 | 0.591 | -- | -- | -- | -0.483 | 20.4 | -- | -- | -- | -- |
| 41.43 | 0.3 | 11.8 | 0.538 | -- | -0.548 | -- | -- | -0.415 | -- | 1009 | 22791 | -- | -- |
| 27.84 | 0.246 | 11.9 | -- | 0.597 | -0.425 | -- | -- | -0.506 | 20.5 | 1009 | 19675 | -- | -- |
| 48.05 | 0.324 | 11.9 | 0.319 | -- | -- | -- | -- | -0.489 | -- | -- | -- | -- | -- |
| 31.34 | 0.262 | 11.9 | -- | 0.59 | -- | -- | -- | -0.519 | 20.4 | -- | -- | -- | -- |
| 47.13 | 0.32 | 11.9 | -- | -- | -0.372 | -- | -- | -0.506 | -- | 1010 | 18885 | -- | -- |
| 50.74 | 0.332 | 11.9 | -- | -- | -- | -- | -- | -0.524 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.33 | humidity | 80 | 43200 | < th | dose dependent | rect. | 12 | 2 |
| 17 | 19.52 | humidity | 80 | 43200 | < th | dose dependent | rect. | 6 | 13 |
| 34 | 19.55 | humidity | 80 | 43200 | < th | dose dependent | sin | 22 | NA |
| 59 | 19.57 | humidity | 70 | 43200 | < th | dose independent | rect. | 11 | 21 |
| 76 | 19.58 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 87 | 19.59 | humidity | 70 | 43200 | > th | dose independent | rect. | 11 | 21 |
| 90 | 19.59 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 22 |
| 92 | 19.59 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 96 | 19.59 | humidity | 70 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 106 | 19.60 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 107 | 19.60 | humidity | 60 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 113 | 19.60 | humidity | 70 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 115 | 19.60 | humidity | 70 | 43200 | < th | dose independent | rect. | 6 | 22 |
| 119 | 19.60 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 120 | 19.60 | humidity | 70 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 125 | 19.60 | humidity | 70 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 127 | 19.60 | humidity | 70 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 128 | 19.60 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 23 |
| 143 | 19.61 | humidity | 70 | 43200 | > th | dose independent | no | NA | NA |
| 150 | 19.61 | humidity | 70 | 43200 | > th | dose independent | rect. | 3 | 22 |
| 169 | 19.61 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 23 |
| 177 | 19.61 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 197 | 19.62 | humidity | 70 | 43200 | < th | dose independent | sin | 16 | NA |
| 199 | 19.62 | humidity | 70 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 299 | 19.63 | humidity | 80 | 43200 | < th | dose dependent | rect. | 12 | 19 |
| 330 | 19.64 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 357 | 19.65 | humidity | 70 | 43200 | > th | dose independent | sin | 16 | NA |
| 413 | 19.66 | humidity | 60 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 414 | 19.66 | humidity | 70 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 490 | 19.67 | humidity | 70 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 492 | 19.67 | humidity | 70 | 43200 | > th | dose independent | rect. | 14 | 14 |
| 550 | 19.68 | humidity | 70 | 43200 | > th | dose independent | sin | 4 | NA |
| 574 | 19.68 | humidity | 80 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 611 | 19.69 | humidity | 70 | 43200 | < th | dose independent | sin | 4 | NA |
| 695 | 19.70 | humidity | 80 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 766 | 19.71 | humidity | 90 | 43200 | < th | dose dependent | no | NA | NA |
| 797 | 19.71 | humidity | 90 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 807 | 19.72 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 851 | 19.73 | humidity | 90 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 909 | 19.74 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 959 | 19.75 | humidity | 50 | 43200 | < th | dose dependent | rect. | 20 | 19 |
| 965 | 19.76 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 981 | 19.76 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 989 | 19.76 | humidity | 50 | 43200 | < th | dose dependent | rect. | 5 | 10 |