Os11g0585100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0585100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.61 | 0.242 | 11.2 | -0.523 | 1.03 | 0.635 | 0.253 | -3.56 | 0.324 | 23.2 | 25.08 | 4271 | -- | -- |
| 27.44 | 0.244 | 11.2 | 0.108 | 1.03 | 0.542 | 0.122 | -- | 0.338 | 23.2 | 16.5 | 8456 | -- | -- |
| 26.82 | 0.241 | 11.2 | -0.674 | 1.03 | 0.736 | -- | -4.37 | 0.318 | 23.2 | 25.9 | 4277 | -- | -- |
| 27.56 | 0.244 | 11.2 | 0.119 | 1.03 | 0.53 | -- | -- | 0.347 | 23.1 | 15.93 | 8464 | -- | -- |
| 83.58 | 0.426 | 11.2 | -0.846 | -- | 1.02 | -- | -4.13 | 0.171 | -- | 24.4 | 2340 | -- | -- |
| 32.89 | 0.269 | 11.1 | 0.426 | 1.05 | -- | 0.236 | -- | 0.521 | 23.2 | -- | -- | -- | -- |
| 33.13 | 0.27 | 11.1 | 0.416 | 1.05 | -- | -- | -- | 0.52 | 23.2 | -- | -- | -- | -- |
| 78.05 | 0.411 | 11.1 | 0.121 | -- | 1.06 | -- | -- | 0.335 | -- | 17.65 | 870 | -- | -- |
| 27.81 | 0.246 | 11.2 | -- | 1.03 | 0.604 | -- | -- | 0.317 | 23.1 | 15.44 | 8507 | -- | -- |
| 102.3 | 0.473 | 11.1 | 0.442 | -- | -- | -- | -- | 0.53 | -- | -- | -- | -- | -- |
| 37.69 | 0.287 | 11.1 | -- | 1.06 | -- | -- | -- | 0.474 | 23.2 | -- | -- | -- | -- |
| 78.41 | 0.412 | 11.1 | -- | -- | 1.11 | -- | -- | 0.316 | -- | 17.5 | 870 | -- | -- |
| 107.45 | 0.484 | 11.1 | -- | -- | -- | -- | -- | 0.481 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.28 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 2 | 25.30 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 7 | 25.54 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 8 | 25.55 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 22 | 25.56 | radiation | 20 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 26 | 25.56 | radiation | 20 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 38 | 25.57 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 43 | 25.61 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 46 | 25.63 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 53 | 25.72 | radiation | 20 | 43200 | < th | dose independent | sin | 11 | NA |
| 66 | 25.78 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 68 | 25.79 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 118 | 25.81 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 124 | 25.81 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 8 |
| 138 | 25.81 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 18 |
| 147 | 25.82 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 4 |
| 177 | 25.83 | radiation | 40 | 43200 | < th | dose independent | sin | 17 | NA |
| 209 | 25.85 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 241 | 25.87 | radiation | 30 | 43200 | < th | dose independent | sin | 4 | NA |
| 280 | 25.88 | radiation | 40 | 43200 | < th | dose independent | no | NA | NA |
| 415 | 25.89 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 714 | 25.93 | radiation | 40 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 754 | 25.94 | radiation | 1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 755 | 25.94 | radiation | 30 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 816 | 25.97 | radiation | 10 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 856 | 25.99 | radiation | 10 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 864 | 26.01 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 906 | 26.02 | radiation | 10 | 43200 | > th | dose dependent | rect. | 17 | 16 |
| 966 | 26.05 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 999 | 26.06 | radiation | 20 | 43200 | > th | dose dependent | rect. | 16 | 18 |