Os11g0582500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Anther specific protein.
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Os11g0582500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Anther specific protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.75 | 0.354 | -189 | 1170 | 0.117 | -48100 | 0.0817 | 294000 | 0.0907 | 6.44 | 995 | 90 | -- | -- |
| 61.35 | 0.368 | 3.09 | 0.182 | 0.099 | 0.913 | 0.0224 | -- | 0.0864 | 6.48 | 995 | 90 | -- | -- |
| 57.76 | 0.354 | -189 | 1170 | 0.116 | -48100 | -- | 294000 | 0.0897 | 6.33 | 995 | 90 | -- | -- |
| 55.27 | 0.346 | 3.09 | 0.178 | 0.114 | 2.64 | -- | -- | 0.0936 | 7.27 | 994.7 | 102 | -- | -- |
| 58.46 | 0.356 | -189 | 1170 | -- | -48100 | -- | 294000 | 0.0921 | -- | 995 | 90 | -- | -- |
| 62.26 | 0.37 | 3.09 | 0.189 | 0.0887 | -- | -0.00796 | -- | 0.0839 | 6.62 | -- | -- | -- | -- |
| 62.26 | 0.37 | 3.09 | 0.189 | 0.0886 | -- | -- | -- | 0.0839 | 6.64 | -- | -- | -- | -- |
| 55.94 | 0.348 | 3.09 | 0.177 | -- | 2.6 | -- | -- | 0.0915 | -- | 994.7 | 115 | -- | -- |
| 56.06 | 0.349 | 3.1 | -- | 0.118 | 2.68 | -- | -- | 0.0699 | 6.43 | 994.7 | 74 | -- | -- |
| 62.67 | 0.37 | 3.09 | 0.191 | -- | -- | -- | -- | 0.0857 | -- | -- | -- | -- | -- |
| 63.21 | 0.372 | 3.1 | -- | 0.091 | -- | -- | -- | 0.0629 | 6.52 | -- | -- | -- | -- |
| 56.76 | 0.351 | 3.1 | -- | -- | 2.62 | -- | -- | 0.0723 | -- | 994.7 | 129 | -- | -- |
| 63.64 | 0.372 | 3.1 | -- | -- | -- | -- | -- | 0.0645 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.39 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 16 | 2 |
| 3 | 49.66 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 16 | 2 |
| 5 | 51.39 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 34 | 53.77 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 14 | 5 |
| 84 | 55.21 | atmosphere | 995 | 30 | > th | dose independent | sin | 8 | NA |
| 86 | 55.21 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 1 |
| 89 | 55.22 | temperature | 30 | 30 | > th | dose independent | rect. | 18 | 1 |
| 154 | 55.33 | atmosphere | 995 | 30 | < th | dose independent | sin | 9 | NA |
| 239 | 55.34 | atmosphere | 995 | 30 | < th | dose dependent | sin | 8 | NA |
| 564 | 55.51 | temperature | 30 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 570 | 55.54 | temperature | 30 | 90 | > th | dose dependent | rect. | 16 | 17 |
| 609 | 55.70 | radiation | 10 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 631 | 55.84 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 6 | 12 |
| 635 | 55.93 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 1 |
| 713 | 56.33 | atmosphere | 995 | 30 | > th | dose independent | rect. | 23 | 23 |
| 721 | 56.36 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 14 | 1 |
| 744 | 56.37 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 14 | 20 |
| 751 | 56.39 | atmosphere | 1000 | 90 | < th | dose dependent | sin | 19 | NA |