Os11g0582400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0582400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.57 | 0.543 | 4.18 | -0.588 | 0.509 | 2.09 | 0.224 | -5.62 | -0.168 | 11.1 | 0.004647 | 6 | -- | -- |
| 145.78 | 0.562 | 4.18 | -0.551 | 0.524 | 1.08 | 0.513 | -- | -0.19 | 11.1 | 0.3992 | 11 | -- | -- |
| 133.78 | 0.539 | 4.18 | -0.57 | 0.511 | 2.08 | -- | -5.66 | -0.169 | 11.1 | 0.1047 | 5 | -- | -- |
| 146.57 | 0.564 | 4.16 | -0.534 | 0.516 | 1.04 | -- | -- | -0.183 | 10.9 | 0.07742 | 11 | -- | -- |
| 149.54 | 0.57 | 4.2 | -0.581 | -- | 1.95 | -- | -5.95 | -0.175 | -- | 0.008926 | 5 | -- | -- |
| 151.48 | 0.577 | 4.17 | -0.505 | 0.493 | -- | 0.333 | -- | -0.204 | 10.5 | -- | -- | -- | -- |
| 151.94 | 0.577 | 4.17 | -0.492 | 0.492 | -- | -- | -- | -0.203 | 10.4 | -- | -- | -- | -- |
| 162.91 | 0.594 | 4.18 | -0.542 | -- | 0.87 | -- | -- | -0.188 | -- | 0.09736 | 11 | -- | -- |
| 154.06 | 0.578 | 4.16 | -- | 0.516 | 0.96 | -- | -- | -0.129 | 10.9 | 0.5 | 10 | -- | -- |
| 166.75 | 0.603 | 4.18 | -0.5 | -- | -- | -- | -- | -0.205 | -- | -- | -- | -- | -- |
| 158.32 | 0.589 | 4.16 | -- | 0.495 | -- | -- | -- | -0.149 | 10.5 | -- | -- | -- | -- |
| 170.42 | 0.608 | 4.16 | -- | -- | 0.75 | -- | -- | -0.129 | -- | 0.6 | 11 | -- | -- |
| 173.35 | 0.615 | 4.17 | -- | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.46 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 2 | 128.47 | wind | 7.0 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 17 | 128.95 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 30 | 130.32 | wind | 1.0 | 10 | < th | dose dependent | rect. | 15 | 11 |
| 31 | 130.33 | wind | 1.0 | 10 | < th | dose dependent | rect. | 21 | 5 |
| 49 | 132.32 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 62 | 133.50 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 9 |
| 65 | 133.52 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 5 |
| 74 | 134.74 | wind | 1.0 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 81 | 135.75 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 120 | 138.84 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 1 |
| 125 | 139.19 | wind | 1.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 140 | 139.88 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 20 |
| 154 | 140.60 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 6 |
| 166 | 141.11 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 18 | 8 |
| 167 | 141.14 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 186 | 141.74 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 20 | 17 |
| 191 | 141.79 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 18 | 17 |
| 194 | 141.88 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 20 | 15 |
| 199 | 141.92 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 218 | 142.18 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 222 | 142.23 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 261 | 142.63 | atmosphere | 1000.0 | 720 | > th | dose dependent | rect. | 21 | 3 |
| 266 | 142.71 | atmosphere | 1000.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 269 | 142.76 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 14 |
| 279 | 142.80 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 22 |
| 283 | 142.82 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 306 | 142.91 | atmosphere | 1000.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 311 | 142.93 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 321 | 142.99 | wind | 1.0 | 10 | < th | dose dependent | rect. | 21 | 11 |
| 384 | 143.17 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 408 | 143.25 | atmosphere | 1000.0 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 421 | 143.30 | atmosphere | 1000.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 473 | 143.40 | wind | 1.0 | 270 | < th | dose dependent | rect. | 9 | 17 |
| 495 | 143.49 | atmosphere | 1015.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 503 | 143.49 | atmosphere | 1000.0 | 720 | > th | dose dependent | rect. | 15 | 15 |
| 511 | 143.51 | humidity | 90.0 | 10 | > th | dose independent | rect. | 1 | 1 |
| 529 | 143.55 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 530 | 143.55 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 5 |
| 533 | 143.56 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 547 | 143.58 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 12 | 22 |
| 563 | 143.61 | atmosphere | 1005.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 602 | 143.64 | atmosphere | 1000.0 | 720 | > th | dose dependent | rect. | 12 | 18 |
| 618 | 143.67 | atmosphere | 1005.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 627 | 143.68 | atmosphere | 1000.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 637 | 143.70 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 716 | 143.80 | wind | 1.0 | 10 | < th | dose dependent | no | NA | NA |
| 774 | 143.88 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 784 | 143.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 831 | 143.97 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 832 | 143.97 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 833 | 143.97 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 2 |
| 848 | 144.00 | temperature | 15.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 856 | 144.01 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 7 |
| 859 | 144.01 | atmosphere | 1015.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 874 | 144.03 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 23 | 14 |
| 885 | 144.05 | wind | 7.0 | 30 | < th | dose dependent | rect. | 15 | 11 |
| 891 | 144.06 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 1 |
| 892 | 144.06 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 901 | 144.06 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 909 | 144.08 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 999 | 144.24 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 5 |