Os11g0579300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0579300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.57 | 0.334 | 7.38 | 0.132 | 0.644 | -0.533 | 0.354 | -0.00327 | -0.0963 | 21.2 | 24.69 | 1116 | -- | -- |
| 50.57 | 0.331 | 7.38 | 0.131 | 0.643 | -0.533 | 0.354 | -- | -0.0973 | 21.2 | 24.7 | 1104 | -- | -- |
| 51 | 0.333 | 7.38 | 0.129 | 0.648 | -0.541 | -- | -0.0642 | -0.0922 | 21.2 | 24.78 | 1126 | -- | -- |
| 51.01 | 0.333 | 7.38 | 0.121 | 0.645 | -0.529 | -- | -- | -0.0953 | 21.2 | 24.7 | 1122 | -- | -- |
| 67.73 | 0.383 | 7.37 | 0.0401 | -- | -0.945 | -- | 0.0173 | -0.133 | -- | 45.24 | 713 | -- | -- |
| 54.54 | 0.346 | 7.36 | 0.288 | 0.676 | -- | 0.337 | -- | 0.0133 | 21.4 | -- | -- | -- | -- |
| 54.95 | 0.347 | 7.36 | 0.275 | 0.674 | -- | -- | -- | 0.0127 | 21.5 | -- | -- | -- | -- |
| 67.73 | 0.383 | 7.37 | 0.043 | -- | -0.944 | -- | -- | -0.132 | -- | 49.84 | 713 | -- | -- |
| 51.34 | 0.334 | 7.39 | -- | 0.636 | -0.588 | -- | -- | -0.117 | 21.2 | 24.7 | 1123 | -- | -- |
| 81.68 | 0.422 | 7.34 | 0.28 | -- | -- | -- | -- | 0.0107 | -- | -- | -- | -- | -- |
| 56.95 | 0.353 | 7.37 | -- | 0.675 | -- | -- | -- | -0.0179 | 21.5 | -- | -- | -- | -- |
| 67.78 | 0.383 | 7.37 | -- | -- | -0.961 | -- | -- | -0.139 | -- | 56.9 | 714 | -- | -- |
| 83.74 | 0.427 | 7.35 | -- | -- | -- | -- | -- | -0.0204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.89 | temperature | 25.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 2 | 49.20 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 6 | 49.46 | temperature | 25.0 | 90 | < th | dose independent | rect. | 10 | 3 |
| 7 | 49.48 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 7 | 6 |
| 23 | 49.70 | temperature | 25.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 25 | 49.74 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 13 |
| 31 | 49.80 | temperature | 25.0 | 90 | < th | dose independent | rect. | 10 | 5 |
| 55 | 49.97 | temperature | 25.0 | 90 | < th | dose independent | rect. | 10 | 7 |
| 113 | 50.25 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 13 |
| 138 | 50.33 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 13 |
| 146 | 50.37 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 21 |
| 160 | 50.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 161 | 50.44 | temperature | 25.0 | 270 | < th | dose independent | sin | 2 | NA |
| 170 | 50.47 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 5 |
| 176 | 50.48 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 9 |
| 177 | 50.49 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 180 | 50.49 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 7 |
| 181 | 50.49 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 8 |
| 192 | 50.51 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 199 | 50.52 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 20 |
| 213 | 50.55 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 17 |
| 216 | 50.56 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 8 |
| 226 | 50.57 | temperature | 25.0 | 270 | > th | dose independent | rect. | 3 | 12 |
| 236 | 50.58 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 240 | 50.58 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 241 | 50.59 | temperature | 25.0 | 270 | > th | dose independent | sin | 2 | NA |
| 249 | 50.59 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 23 |
| 250 | 50.60 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 5 |
| 276 | 50.62 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 290 | 50.64 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 292 | 50.64 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 305 | 50.66 | wind | 5.0 | 720 | < th | dose independent | rect. | 3 | 7 |
| 400 | 50.75 | temperature | 15.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 492 | 50.81 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 496 | 50.82 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 10 |
| 527 | 50.84 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 617 | 50.88 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 11 |
| 651 | 50.90 | radiation | 30.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 714 | 50.93 | temperature | 25.0 | 90 | < th | dose independent | rect. | 10 | 13 |
| 802 | 50.97 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 20 |
| 803 | 50.97 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 814 | 50.98 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 835 | 50.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 858 | 50.99 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 12 |
| 913 | 51.01 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 915 | 51.01 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 22 |
| 927 | 51.01 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 965 | 51.03 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 8 |