Os11g0579200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0579200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.42 | 0.588 | 3.1 | 1.08 | 0.143 | -1.01 | 0.601 | -1.74 | 0.642 | 6.94 | 1010 | 9718 | -- | -- |
| 162.83 | 0.594 | 3.05 | 1.65 | 0.112 | -1.04 | 0.547 | -- | 0.697 | 7.19 | 1009 | 10468 | -- | -- |
| 157.12 | 0.584 | 3.1 | 1.11 | 0.155 | -1.01 | -- | -1.72 | 0.636 | 5.46 | 1010 | 9607 | -- | -- |
| 163.37 | 0.595 | 3.06 | 1.67 | 0.146 | -1.03 | -- | -- | 0.7 | 6.04 | 1009 | 10463 | -- | -- |
| 158.18 | 0.586 | 3.1 | 1.16 | -- | -1.04 | -- | -1.71 | 0.651 | -- | 1010 | 9361 | -- | -- |
| 200.85 | 0.664 | 3.11 | 1.3 | 0.0852 | -- | 0.549 | -- | 0.489 | 8.57 | -- | -- | -- | -- |
| 201.67 | 0.665 | 3.11 | 1.32 | 0.103 | -- | -- | -- | 0.487 | 6.55 | -- | -- | -- | -- |
| 161.02 | 0.591 | 3.05 | 1.94 | -- | -1.36 | -- | -- | 0.734 | -- | 1009 | 26565 | -- | -- |
| 230.67 | 0.707 | 3.1 | -- | 0.135 | -0.875 | -- | -- | 0.52 | 6.14 | 1009 | 15466 | -- | -- |
| 202.22 | 0.664 | 3.11 | 1.32 | -- | -- | -- | -- | 0.489 | -- | -- | -- | -- | -- |
| 247.56 | 0.736 | 3.14 | -- | 0.122 | -- | -- | -- | 0.34 | 5.93 | -- | -- | -- | -- |
| 229.6 | 0.706 | 3.12 | -- | -- | -0.81 | -- | -- | 0.447 | -- | 1008 | 11838 | -- | -- |
| 248.32 | 0.736 | 3.14 | -- | -- | -- | -- | -- | 0.343 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.14 | temperature | 15 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 8 | 155.26 | temperature | 30 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 11 | 155.29 | temperature | 10 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 13 | 155.30 | temperature | 30 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 58 | 155.43 | temperature | 30 | 43200 | < th | dose dependent | rect. | 19 | 13 |
| 59 | 155.43 | temperature | 10 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 131 | 155.49 | temperature | 10 | 43200 | > th | dose dependent | sin | 9 | NA |
| 168 | 155.51 | temperature | 10 | 43200 | > th | dose dependent | rect. | 18 | 10 |
| 187 | 155.52 | temperature | 30 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 202 | 155.53 | temperature | 30 | 43200 | < th | dose dependent | sin | 10 | NA |
| 292 | 155.57 | temperature | 30 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 335 | 155.59 | temperature | 10 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 401 | 155.62 | temperature | 10 | 43200 | > th | dose dependent | no | NA | NA |
| 419 | 155.62 | temperature | 10 | 43200 | > th | dose dependent | rect. | 1 | 22 |
| 451 | 155.63 | temperature | 10 | 43200 | > th | dose dependent | rect. | 5 | 23 |