Os11g0578700 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0578700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	3.55	(0.0325)	R²	:	0.433
β₁	:	1.21	(0.119)	R²_dD	:	0.135	R²_D	:	0.0433
β₂	:	0.878	(0.0769)	R²_dC	:	0.163	R²_C	:	0.13
β₃	:	--	(--)	R²_dE	:	--	R²_E	:	--
β₄	:	2.38	(0.293)	R²_dD*C	:	0.0834	R²_D*C	:	0.0321
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	0.659	(0.0692)	R²_dN8	:	0.151	R²_N8	:	0.0718
σ	:	0.611
deviance	:	169.6
__

_____

C
peak time of C	:	23.7
E
wheather	:	--
threshold	:	--
memory length	:	--
response mode	:	--
dose dependency	:	--
G
type of G	:	--
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
157.75	0.59	3.52	1.35	0.00428	0.745	-3.76	-1.17	0.681	11	0.6938	30	--	--
158.83	0.587	3.53	1.29	0.0148	0.725	2.47	--	0.68	22.7	0.6812	26	--	--
165.77	0.604	3.54	1.13	0.202	0.6	--	1.68	0.651	2.06	0.6938	30	--	--
183.97	0.636	3.54	1.16	0.16	0.656	--	--	0.663	3.26	0.72	25	--	--
165.8	0.6	3.54	1.16	--	0.723	--	1.72	0.651	--	0.7574	26	--	--
169.6	0.611	3.55	1.21	0.878	--	2.38	--	0.659	23.7	--	--	--	--
193.86	0.652	3.55	1.12	0.871	--	--	--	0.647	0.131	--	--	--	--
184.07	0.632	3.54	1.18	--	0.729	--	--	0.661	--	0.69	25	--	--
219.43	0.694	3.57	--	0.265	0.559	--	--	0.531	1.87	0.72	25	--	--
241.6	0.726	3.54	1.14	--	--	--	--	0.659	--	--	--	--	--
226.64	0.704	3.58	--	0.886	--	--	--	0.522	0.2	--	--	--	--
220.7	0.692	3.57	--	--	0.716	--	--	0.533	--	0.9503	25	--	--
276.07	0.776	3.57	--	--	--	--	--	0.533	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	144.86	atmosphere	1005.0	720	> th	dose independent	rect.	17	1
7	148.44	wind	1.0	720	< th	dose independent	rect.	13	2
13	149.54	wind	1.0	720	< th	dose dependent	rect.	13	2
14	149.58	atmosphere	1000.0	720	> th	dose dependent	rect.	17	2
18	150.13	atmosphere	1005.0	720	< th	dose independent	rect.	15	4
35	151.38	atmosphere	995.0	270	> th	dose dependent	rect.	15	12
45	151.74	atmosphere	1000.0	30	> th	dose dependent	rect.	18	11
54	152.15	atmosphere	995.0	720	> th	dose dependent	rect.	13	6
69	152.60	atmosphere	1005.0	14400	> th	dose independent	rect.	16	1
87	153.01	atmosphere	1005.0	14400	< th	dose independent	rect.	16	1
98	153.25	humidity	90.0	1440	> th	dose dependent	rect.	6	6
99	153.26	humidity	90.0	1440	> th	dose dependent	rect.	6	4
104	153.36	wind	1.0	720	< th	dose independent	rect.	12	7
131	153.63	wind	1.0	720	< th	dose dependent	rect.	12	7
142	153.78	atmosphere	1005.0	10	> th	dose dependent	rect.	24	5
162	153.94	wind	1.0	720	< th	dose independent	rect.	9	10
166	153.99	atmosphere	1015.0	720	< th	dose dependent	rect.	12	9
175	154.07	precipitation	0.1	270	> th	dose independent	rect.	22	2
177	154.07	precipitation	0.1	270	> th	dose dependent	rect.	22	2
186	154.16	radiation	1.0	1440	< th	dose dependent	rect.	18	18
201	154.25	precipitation	0.1	1440	< th	dose independent	rect.	6	2
203	154.25	precipitation	0.1	1440	< th	dose dependent	rect.	6	2
206	154.26	precipitation	0.1	1440	< th	dose independent	rect.	5	5
208	154.26	precipitation	0.1	1440	< th	dose dependent	rect.	5	5
218	154.40	atmosphere	1015.0	270	< th	dose dependent	rect.	14	16
222	154.45	atmosphere	1000.0	10	> th	dose dependent	rect.	22	7
233	154.50	wind	1.0	720	< th	dose dependent	rect.	9	10
238	154.52	wind	1.0	720	> th	dose independent	rect.	9	6
239	154.53	atmosphere	1005.0	270	> th	dose independent	rect.	15	11
251	154.59	wind	1.0	720	< th	dose independent	rect.	9	15
264	154.68	atmosphere	1005.0	720	> th	dose independent	rect.	13	12
279	154.77	temperature	30.0	14400	< th	dose independent	rect.	15	1
315	154.91	temperature	30.0	14400	> th	dose independent	rect.	15	1
325	154.94	radiation	1.0	1440	< th	dose independent	rect.	23	15
331	154.97	wind	1.0	720	> th	dose independent	rect.	10	14
333	154.98	radiation	1.0	1440	< th	dose independent	rect.	19	19
339	155.00	radiation	1.0	1440	> th	dose independent	rect.	5	9
341	155.02	radiation	1.0	1440	< th	dose independent	rect.	5	9
342	155.02	radiation	1.0	1440	< th	dose independent	rect.	3	11
367	155.06	radiation	1.0	14400	> th	dose independent	rect.	7	3
379	155.08	precipitation	0.1	1440	< th	dose independent	rect.	5	7
382	155.08	precipitation	0.1	1440	< th	dose dependent	rect.	5	7
394	155.12	radiation	1.0	1440	> th	dose independent	rect.	5	5
403	155.14	radiation	1.0	14400	< th	dose independent	rect.	7	3
423	155.15	humidity	70.0	90	> th	dose dependent	rect.	16	11
424	155.16	radiation	1.0	1440	> th	dose independent	sin	5	NA
426	155.16	radiation	1.0	1440	< th	dose independent	sin	6	NA
440	155.17	humidity	70.0	14400	< th	dose independent	rect.	18	1
476	155.20	radiation	1.0	1440	> th	dose independent	rect.	5	3
535	155.24	radiation	1.0	1440	< th	dose dependent	rect.	23	14
556	155.27	radiation	1.0	1440	< th	dose independent	rect.	19	13
568	155.29	precipitation	0.1	270	> th	dose independent	rect.	20	4
572	155.29	precipitation	0.1	270	> th	dose dependent	rect.	20	4
590	155.31	radiation	1.0	1440	< th	dose independent	rect.	3	5
596	155.32	atmosphere	1005.0	43200	< th	dose independent	rect.	13	1
610	155.34	humidity	80.0	14400	> th	dose independent	rect.	14	2
615	155.34	wind	1.0	720	< th	dose independent	rect.	12	12
619	155.34	radiation	1.0	1440	< th	dose dependent	rect.	3	9
656	155.39	atmosphere	1010.0	720	< th	dose dependent	rect.	17	3
682	155.42	humidity	90.0	1440	> th	dose independent	rect.	6	4
711	155.47	humidity	80.0	14400	< th	dose independent	rect.	14	2
715	155.47	radiation	1.0	1440	< th	dose dependent	sin	6	NA
745	155.53	precipitation	0.1	1440	> th	dose independent	rect.	23	14
750	155.54	precipitation	0.1	1440	< th	dose independent	rect.	23	11
752	155.54	precipitation	0.1	1440	< th	dose dependent	rect.	23	11
756	155.55	precipitation	0.1	1440	> th	dose independent	rect.	23	12
764	155.56	wind	3.0	43200	< th	dose dependent	rect.	24	5
787	155.58	precipitation	0.1	1440	< th	dose independent	rect.	1	9
791	155.58	precipitation	0.1	1440	< th	dose dependent	rect.	1	9
792	155.59	atmosphere	1005.0	43200	> th	dose independent	rect.	13	1
793	155.59	humidity	90.0	1440	> th	dose independent	rect.	6	6
803	155.61	wind	1.0	720	< th	dose dependent	rect.	9	15
807	155.62	temperature	10.0	14400	> th	dose dependent	rect.	14	2
813	155.64	precipitation	0.1	1440	> th	dose independent	rect.	5	8
843	155.71	precipitation	0.1	1440	< th	dose independent	rect.	23	13
846	155.71	precipitation	0.1	1440	< th	dose dependent	rect.	23	13
863	155.75	precipitation	0.1	1440	> th	dose independent	rect.	5	6
864	155.75	humidity	80.0	14400	< th	dose independent	rect.	9	7
872	155.76	precipitation	0.1	1440	> th	dose independent	rect.	5	4
880	155.76	precipitation	0.1	1440	> th	dose dependent	rect.	23	14
899	155.78	precipitation	0.1	1440	> th	dose dependent	rect.	23	12
904	155.79	humidity	80.0	14400	> th	dose independent	rect.	9	7
909	155.80	atmosphere	1005.0	720	> th	dose independent	sin	18	NA
916	155.80	atmosphere	1005.0	270	> th	dose dependent	rect.	23	3
950	155.85	radiation	1.0	14400	< th	dose dependent	rect.	7	1
956	155.86	temperature	30.0	14400	< th	dose independent	rect.	14	6
960	155.86	temperature	30.0	14400	< th	dose independent	rect.	14	15
977	155.87	precipitation	0.1	4320	< th	dose independent	rect.	3	14
982	155.87	precipitation	0.1	4320	< th	dose dependent	rect.	3	14