Os11g0576900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os11g0576900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.59 | 0.357 | 8.24 | -0.133 | 0.48 | -1.81 | -0.178 | 0.601 | 0.257 | 0.82 | 30.76 | 12 | -- | -- |
| 57.91 | 0.354 | 8.23 | -0.0326 | 0.488 | -1.81 | -7.61e-05 | -- | 0.28 | 0.843 | 30.61 | 12 | -- | -- |
| 57.69 | 0.354 | 8.24 | -0.0975 | 0.483 | -1.82 | -- | 0.42 | 0.265 | 0.827 | 30.79 | 12 | -- | -- |
| 57.91 | 0.354 | 8.23 | -0.0321 | 0.487 | -1.81 | -- | -- | 0.28 | 0.845 | 30.61 | 12 | -- | -- |
| 62.54 | 0.368 | 8.24 | -0.0511 | -- | -1.52 | -- | 0.711 | 0.323 | -- | 30.65 | 412 | -- | -- |
| 100.19 | 0.469 | 8.15 | 0.392 | 0.231 | -- | 0.287 | -- | 0.614 | 17.5 | -- | -- | -- | -- |
| 100.39 | 0.469 | 8.15 | 0.391 | 0.233 | -- | -- | -- | 0.615 | 17.6 | -- | -- | -- | -- |
| 61.76 | 0.366 | 8.22 | 0.00538 | -- | -1.55 | -- | -- | 0.31 | -- | 26.84 | 396 | -- | -- |
| 57.93 | 0.354 | 8.23 | -- | 0.483 | -1.8 | -- | -- | 0.286 | 0.829 | 30.62 | 12 | -- | -- |
| 103.22 | 0.475 | 8.15 | 0.383 | -- | -- | -- | -- | 0.609 | -- | -- | -- | -- | -- |
| 104.41 | 0.478 | 8.16 | -- | 0.227 | -- | -- | -- | 0.572 | 17.7 | -- | -- | -- | -- |
| 61.5 | 0.365 | 8.23 | -- | -- | -1.62 | -- | -- | 0.275 | -- | 25.5 | 402 | -- | -- |
| 107.09 | 0.483 | 8.16 | -- | -- | -- | -- | -- | 0.567 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 6 | 57.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 9 | 57.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 11 | 57.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 16 | 57.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 11 |
| 22 | 57.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 30 | 57.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 37 | 57.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 60 | 57.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 68 | 57.54 | temperature | 10 | 1440 | > th | dose dependent | sin | 8 | NA |
| 72 | 57.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 84 | 57.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 87 | 57.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 97 | 57.67 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 132 | 57.80 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 133 | 57.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 195 | 57.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 198 | 57.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 261 | 58.14 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 267 | 58.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 272 | 58.17 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 315 | 58.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 563 | 58.88 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 592 | 58.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 938 | 59.57 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 959 | 59.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 967 | 59.63 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 968 | 59.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 996 | 59.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |