Os11g0576700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0576700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 425.93 | 0.97 | 5.12 | -4.78 | 0.188 | 2.06 | -0.532 | -2.16 | -1.35 | 12.4 | 76.99 | 1200 | -- | -- |
| 430.97 | 0.967 | 5.1 | -4.62 | 0.197 | 1.91 | -0.267 | -- | -1.32 | 12 | 76.99 | 1186 | -- | -- |
| 427.02 | 0.962 | 5.12 | -4.78 | 0.196 | 2.06 | -- | -1.89 | -1.35 | 11.9 | 77 | 1196 | -- | -- |
| 431.15 | 0.967 | 5.09 | -4.62 | 0.2 | 1.89 | -- | -- | -1.33 | 11.7 | 77 | 1182 | -- | -- |
| 428.75 | 0.964 | 5.12 | -4.76 | -- | 1.96 | -- | -1.84 | -1.34 | -- | 76.09 | 1222 | -- | -- |
| 508.05 | 1.06 | 5.12 | -4.27 | 0.184 | -- | 0.582 | -- | -1.43 | 1.45 | -- | -- | -- | -- |
| 509.42 | 1.06 | 5.12 | -4.28 | 0.184 | -- | -- | -- | -1.43 | 1.57 | -- | -- | -- | -- |
| 432.7 | 0.969 | 5.1 | -4.62 | -- | 1.8 | -- | -- | -1.32 | -- | 76 | 1222 | -- | -- |
| 957.61 | 1.44 | 5.02 | -- | 0.0604 | 1.38 | -- | -- | -0.998 | 11.5 | 93.42 | 1264 | -- | -- |
| 511.49 | 1.06 | 5.12 | -4.28 | -- | -- | -- | -- | -1.43 | -- | -- | -- | -- | -- |
| 993.35 | 1.47 | 5.01 | -- | 0.113 | -- | -- | -- | -0.953 | 0.328 | -- | -- | -- | -- |
| 957.75 | 1.44 | 5.03 | -- | -- | 1.27 | -- | -- | -0.995 | -- | 94 | 1308 | -- | -- |
| 994.16 | 1.47 | 5.01 | -- | -- | -- | -- | -- | -0.952 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 431.28 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 2 | 431.39 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 11 |
| 3 | 431.51 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 8 | 431.69 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 9 | 432.02 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 25 | 433.20 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 31 | 433.74 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 32 | 433.74 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 13 |
| 35 | 433.77 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 17 |
| 44 | 433.82 | temperature | 25 | 720 | > th | dose dependent | sin | 16 | NA |
| 46 | 433.83 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 7 |
| 47 | 433.84 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 50 | 433.85 | humidity | 60 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 61 | 434.39 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 80 | 434.59 | humidity | 60 | 1440 | > th | dose independent | sin | 15 | NA |
| 88 | 434.92 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 111 | 435.24 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 118 | 435.39 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 1 |
| 121 | 435.55 | humidity | 60 | 1440 | < th | dose independent | sin | 15 | NA |
| 251 | 437.01 | humidity | 60 | 1440 | < th | dose dependent | rect. | 14 | 20 |
| 259 | 437.30 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 299 | 437.64 | humidity | 60 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 344 | 438.09 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 14 |
| 354 | 438.26 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 364 | 438.44 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 380 | 438.51 | humidity | 70 | 1440 | < th | dose dependent | sin | 13 | NA |
| 444 | 438.84 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 468 | 438.95 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 6 |
| 470 | 438.95 | humidity | 80 | 1440 | < th | dose dependent | sin | 21 | NA |
| 495 | 439.13 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 549 | 439.38 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 550 | 439.38 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 563 | 439.45 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 21 |
| 564 | 439.45 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 568 | 439.46 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 569 | 439.46 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 577 | 439.48 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 585 | 439.50 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 17 |
| 620 | 439.68 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 695 | 439.93 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 697 | 439.93 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 710 | 439.95 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 716 | 439.97 | humidity | 60 | 1440 | > th | dose independent | no | NA | NA |
| 772 | 440.02 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 899 | 440.75 | humidity | 60 | 1440 | < th | dose independent | no | NA | NA |
| 983 | 440.81 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 2 |