Os11g0576400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0576400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.14 | 0.428 | 7.58 | 1.5 | 0.854 | 0.119 | 0.3 | -5.93 | 0.45 | 20.9 | 29.94 | 3179 | -- | -- |
| 84.56 | 0.428 | 7.48 | 2.4 | 0.858 | -0.519 | 0.268 | -- | 0.441 | 21 | 30.63 | 2717 | -- | -- |
| 83.23 | 0.425 | 7.58 | 1.49 | 0.856 | 0.101 | -- | -5.44 | 0.448 | 20.9 | 29.9 | 2705 | -- | -- |
| 84.83 | 0.429 | 7.48 | 2.42 | 0.869 | -0.585 | -- | -- | 0.452 | 20.9 | 30.01 | 3249 | -- | -- |
| 124.46 | 0.52 | 7.59 | 1.08 | -- | 0.305 | -- | -6.71 | 0.393 | -- | 29.06 | 2947 | -- | -- |
| 96.08 | 0.46 | 7.45 | 2.27 | 0.847 | -- | 0.255 | -- | 0.551 | 20.7 | -- | -- | -- | -- |
| 96.3 | 0.46 | 7.45 | 2.26 | 0.847 | -- | -- | -- | 0.551 | 20.7 | -- | -- | -- | -- |
| 124.46 | 0.52 | 7.44 | 2.41 | -- | -0.492 | -- | -- | 0.486 | -- | 29.8 | 5800 | -- | -- |
| 230.22 | 0.707 | 7.51 | -- | 0.847 | -0.144 | -- | -- | 0.268 | 21 | 30.6 | 3192 | -- | -- |
| 136.88 | 0.547 | 7.43 | 2.26 | -- | -- | -- | -- | 0.544 | -- | -- | -- | -- | -- |
| 231.07 | 0.711 | 7.51 | -- | 0.842 | -- | -- | -- | 0.299 | 20.9 | -- | -- | -- | -- |
| 258.82 | 0.749 | 7.5 | -- | -- | 0.655 | -- | -- | 0.232 | -- | 23.8 | 698 | -- | -- |
| 271.56 | 0.769 | 7.48 | -- | -- | -- | -- | -- | 0.293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.45 | temperature | 10 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 2 | 82.89 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 4 | 83.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 8 | 83.06 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 9 | 83.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 11 | 83.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 16 | 83.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 20 | 83.09 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 24 | 83.12 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 30 | 83.15 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 33 | 83.16 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 36 | 83.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 66 | 83.22 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 137 | 83.28 | wind | 1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 165 | 83.41 | temperature | 30 | 1440 | > th | dose dependent | sin | 6 | NA |
| 199 | 83.44 | temperature | 30 | 1440 | > th | dose independent | sin | 7 | NA |
| 201 | 83.44 | temperature | 30 | 1440 | < th | dose independent | sin | 8 | NA |
| 208 | 83.47 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 227 | 83.48 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 228 | 83.48 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 233 | 83.50 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 243 | 83.53 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 257 | 83.56 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 308 | 83.59 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 413 | 83.64 | temperature | 30 | 4320 | > th | dose dependent | sin | 19 | NA |
| 490 | 83.68 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 494 | 83.68 | temperature | 30 | 4320 | > th | dose dependent | no | NA | NA |
| 640 | 83.73 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 645 | 83.73 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 14 |
| 646 | 83.73 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 650 | 83.74 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 659 | 83.75 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 713 | 83.77 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 714 | 83.77 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 744 | 83.79 | temperature | 30 | 4320 | > th | dose independent | rect. | 10 | 7 |
| 752 | 83.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 835 | 83.84 | temperature | 30 | 4320 | > th | dose independent | sin | 18 | NA |
| 901 | 83.85 | temperature | 30 | 4320 | > th | dose independent | no | NA | NA |