Os11g0575600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lipoxygenase (Fragment).
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Os11g0575600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lipoxygenase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.94 | 0.384 | 2.93 | 0.0232 | 0.121 | 1.11 | -0.395 | 2.68 | 0.058 | 4.15 | 7.019 | 89 | -- | -- |
| 68.13 | 0.387 | 2.91 | -0.00278 | 0.12 | 0.526 | -0.649 | -- | 0.0674 | 3.68 | 7.019 | 89 | -- | -- |
| 63.28 | 0.373 | 2.94 | 0.025 | 0.138 | 1.16 | -- | 2.9 | 0.0412 | 4.53 | 7.019 | 89 | -- | -- |
| 69.31 | 0.39 | 2.91 | -0.00327 | 0.113 | 0.461 | -- | -- | 0.0693 | 4.48 | 7.019 | 89 | -- | -- |
| 64.22 | 0.375 | 2.94 | 0.0178 | -- | 1.07 | -- | 2.82 | 0.0436 | -- | 7 | 89 | -- | -- |
| 71.66 | 0.397 | 2.91 | -0.0877 | 0.0424 | -- | -0.408 | -- | 0.0553 | 3.13 | -- | -- | -- | -- |
| 72.16 | 0.398 | 2.91 | -0.0792 | 0.0522 | -- | -- | -- | 0.0574 | 5.36 | -- | -- | -- | -- |
| 69.94 | 0.391 | 2.91 | -0.00854 | -- | 0.404 | -- | -- | 0.0706 | -- | 7 | 89 | -- | -- |
| 69.31 | 0.39 | 2.91 | -- | 0.113 | 0.462 | -- | -- | 0.0697 | 4.48 | 7.019 | 89 | -- | -- |
| 72.3 | 0.397 | 2.91 | -0.0775 | -- | -- | -- | -- | 0.0587 | -- | -- | -- | -- | -- |
| 72.33 | 0.398 | 2.91 | -- | 0.0508 | -- | -- | -- | 0.0663 | 5.42 | -- | -- | -- | -- |
| 69.94 | 0.391 | 2.91 | -- | -- | 0.407 | -- | -- | 0.0716 | -- | 7 | 89 | -- | -- |
| 72.46 | 0.397 | 2.91 | -- | -- | -- | -- | -- | 0.0673 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.92 | radiation | 30.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 17 | 57.81 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 69 | 60.95 | wind | 7.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 70 | 61.04 | wind | 7.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 71 | 61.18 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 73 | 61.26 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 115 | 61.71 | wind | 7.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 154 | 64.16 | temperature | 30.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 200 | 65.39 | wind | 5.0 | 90 | > th | dose dependent | rect. | 11 | 5 |
| 239 | 65.78 | wind | 7.0 | 30 | > th | dose independent | sin | 20 | NA |
| 255 | 65.90 | wind | 7.0 | 90 | > th | dose independent | rect. | 14 | 21 |
| 289 | 66.07 | wind | 7.0 | 90 | < th | dose independent | sin | 21 | NA |
| 318 | 66.12 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 344 | 66.15 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 357 | 66.20 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 367 | 66.23 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 379 | 66.26 | wind | 7.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 383 | 66.27 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 385 | 66.27 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 386 | 66.27 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 390 | 66.27 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 392 | 66.27 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 397 | 66.27 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 398 | 66.27 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 399 | 66.27 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 404 | 66.27 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 417 | 66.33 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 459 | 66.44 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 476 | 66.48 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 610 | 66.69 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 615 | 66.69 | wind | 7.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 766 | 66.89 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 24 | 3 |
| 781 | 66.91 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 24 | 3 |
| 874 | 66.99 | wind | 7.0 | 90 | > th | dose independent | no | NA | NA |
| 929 | 67.05 | wind | 7.0 | 90 | < th | dose independent | no | NA | NA |