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Os11g0575500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF563 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.52 (0.0366) R2 : 0.497
β1 : 1.55 (0.134) R2dD : 0.153 R2D : 0.0724
β2 : 2.23 (0.133) R2dC : 0.689 R2C : -0.0439
β3 : 1.13 (0.0996) R2dE : 0.318 R2E : -0.366
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.6 (0.0785) R2dN8 : 0.084 R2N8 : 0.0445
σ : 0.683
deviance : 214.98
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_____
C
peak time of C : 14.4
E
wheather : atmosphere
threshold : 998.1
memory length : 11
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 16.4
open length of G : 16.5

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
201.64 0.667 9.53 1.63 2.17 1.09 -0.688 1 0.598 14.5 998.4 10 16.4 16.5
203.52 0.67 9.52 1.59 2.25 1.15 -1.78 -- 0.613 14.3 998.4 10 16.4 16.5
201.22 0.666 9.52 1.62 2.16 1.07 -- 1.44 0.626 14.5 998.4 10 16.4 16.5
214.98 0.683 9.52 1.55 2.23 1.13 -- -- 0.6 14.4 998.1 11 16.4 16.5
260.04 0.751 9.5 1.44 -- -1.23 -- 1.06 0.639 -- 993.7 340 18.3 16.5
255.2 0.749 9.51 1.53 1.3 -- -1.27 -- 0.701 15.9 -- -- -- --
259.47 0.754 9.52 1.52 1.3 -- -- -- 0.694 16.2 -- -- -- --
251.96 0.739 9.53 1.46 -- -1.17 -- -- 0.625 -- 992.8 321 18.6 14.8
278.33 0.777 9.53 -- 2.14 1.06 -- -- 0.496 14.4 998.3 12 16.6 16.2
350.89 0.875 9.51 1.46 -- -- -- -- 0.659 -- -- -- -- --
320.02 0.837 9.56 -- 1.27 -- -- -- 0.525 16.2 -- -- -- --
309.88 0.82 9.54 -- -- -1.22 -- -- 0.521 -- 992.4 317 18.7 14.9
407.37 0.942 9.55 -- -- -- -- -- 0.497 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 207.71 atmosphere 1000.0 10 > th dose independent rect. 16 16
13 212.61 temperature 10.0 90 > th dose dependent rect. 7 9
15 213.21 temperature 10.0 30 > th dose dependent rect. 21 19
24 214.07 temperature 10.0 10 > th dose dependent rect. 8 8
34 214.89 atmosphere 995.0 270 > th dose independent rect. 14 5
36 215.24 temperature 10.0 90 > th dose dependent rect. 19 22
38 215.30 temperature 20.0 270 > th dose independent rect. 14 5
39 215.35 temperature 15.0 10 > th dose dependent rect. 23 17
43 215.71 radiation 40.0 10 < th dose dependent rect. 16 16
45 215.77 humidity 80.0 270 < th dose independent rect. 16 1
49 216.00 humidity 80.0 270 < th dose independent rect. 15 3
52 216.03 humidity 80.0 270 < th dose independent rect. 14 5
63 216.21 atmosphere 995.0 270 > th dose independent rect. 3 16
66 216.32 radiation 20.0 90 < th dose independent rect. 16 16
70 216.49 temperature 20.0 270 > th dose independent rect. 15 3
84 216.91 wind 3.0 270 > th dose independent rect. 14 5
95 217.16 wind 3.0 270 > th dose independent rect. 16 2
100 217.32 wind 1.0 270 > th dose dependent rect. 16 2
101 217.43 wind 1.0 90 > th dose dependent rect. 16 5
132 218.07 atmosphere 1000.0 30 > th dose independent rect. 5 16
139 218.27 atmosphere 995.0 270 > th dose dependent rect. 14 5
152 218.56 humidity 50.0 10 > th dose independent rect. 16 16
166 218.77 radiation 20.0 10 < th dose independent rect. 16 16
167 218.78 radiation 1.0 270 > th dose independent rect. 16 1
173 218.89 precipitation 0.1 90 < th dose independent rect. 8 8
175 218.89 precipitation 0.1 90 < th dose dependent rect. 8 8
193 219.14 radiation 1.0 270 > th dose independent rect. 15 14
195 219.19 temperature 10.0 90 > th dose independent rect. 8 8
196 219.19 atmosphere 1015.0 90 < th dose independent rect. 8 8
197 219.19 temperature 10.0 90 > th dose independent rect. 16 16
199 219.21 radiation 1.0 270 > th dose independent rect. 15 4
211 219.22 temperature 10.0 270 > th dose dependent rect. 14 7
214 219.24 atmosphere 1000.0 10 > th dose independent rect. 16 7
215 219.25 wind 9.0 90 < th dose independent rect. 8 8
218 219.27 radiation 1.0 90 > th dose independent rect. 8 8
223 219.30 wind 7.0 270 < th dose independent rect. 19 19
225 219.33 wind 1.0 90 > th dose independent rect. 8 8
228 219.39 wind 7.0 270 < th dose independent rect. 19 8
237 219.51 radiation 30.0 10 < th dose dependent rect. 16 20
249 219.65 precipitation 0.1 270 < th dose independent rect. 19 19
250 219.65 precipitation 0.1 270 < th dose dependent rect. 19 19
257 219.71 wind 1.0 10 > th dose independent rect. 8 8
259 219.73 atmosphere 1000.0 10 > th dose independent rect. 16 5
262 219.77 humidity 90.0 270 < th dose dependent rect. 16 2
265 219.79 radiation 40.0 10 < th dose dependent rect. 16 22
290 219.97 temperature 10.0 270 > th dose independent rect. 14 5
292 219.97 atmosphere 1010.0 270 < th dose independent rect. 14 5
294 219.97 temperature 10.0 270 > th dose independent rect. 19 19
295 219.97 atmosphere 995.0 270 > th dose independent rect. 19 19
313 220.12 temperature 20.0 30 > th dose independent rect. 16 5
319 220.14 wind 9.0 10 < th dose independent rect. 8 8
323 220.15 temperature 10.0 10 > th dose dependent rect. 19 23
326 220.18 atmosphere 1015.0 90 < th dose independent rect. 16 16
332 220.25 temperature 10.0 270 > th dose dependent rect. 16 2
334 220.27 precipitation 0.1 270 < th dose independent rect. 6 9
337 220.27 precipitation 0.1 270 < th dose dependent rect. 6 9
340 220.29 temperature 10.0 43200 > th dose independent rect. 10 7
348 220.36 wind 9.0 270 < th dose independent rect. 6 9
349 220.36 temperature 10.0 270 > th dose independent rect. 6 9
350 220.36 atmosphere 1015.0 270 < th dose independent rect. 6 9
353 220.37 wind 9.0 90 < th dose independent rect. 16 16
354 220.39 temperature 10.0 10 > th dose independent rect. 8 8
356 220.39 atmosphere 1015.0 10 < th dose independent rect. 8 8
357 220.39 precipitation 0.1 10 < th dose independent rect. 8 8
358 220.39 temperature 10.0 10 > th dose independent rect. 16 16
359 220.39 precipitation 0.1 10 < th dose dependent rect. 8 8
366 220.43 radiation 20.0 10 < th dose dependent rect. 6 15
370 220.45 precipitation 0.1 90 < th dose independent rect. 21 19
371 220.45 radiation 1.0 270 < th dose dependent rect. 15 12
372 220.45 precipitation 0.1 90 < th dose dependent rect. 21 19
375 220.47 atmosphere 995.0 10 > th dose dependent rect. 16 16
382 220.56 precipitation 0.1 270 < th dose independent rect. 14 5
384 220.56 precipitation 0.1 270 < th dose dependent rect. 14 5
416 220.75 radiation 40.0 10 < th dose dependent rect. 11 10
420 220.78 radiation 20.0 10 < th dose dependent sin 21 NA
425 220.84 temperature 10.0 1440 > th dose independent rect. 9 8
428 220.84 temperature 10.0 1440 > th dose independent rect. 17 16
433 220.85 radiation 1.0 270 < th dose dependent sin 14 NA
438 220.88 radiation 10.0 10 < th dose independent rect. 16 5
446 220.92 radiation 40.0 270 < th dose independent rect. 15 4
480 221.09 wind 9.0 270 < th dose independent rect. 14 5
484 221.13 wind 1.0 90 > th dose dependent rect. 16 7
494 221.18 radiation 30.0 10 < th dose dependent rect. 16 5
525 221.32 humidity 60.0 270 > th dose independent rect. 19 8
527 221.33 temperature 10.0 270 > th dose independent rect. 19 8
528 221.33 temperature 30.0 270 < th dose independent rect. 19 8
530 221.33 atmosphere 995.0 270 > th dose independent rect. 19 8
531 221.33 radiation 1.0 270 < th dose independent rect. 19 8
536 221.33 temperature 10.0 270 > th dose independent rect. 3 16
537 221.33 atmosphere 1015.0 270 < th dose independent rect. 3 16
538 221.33 radiation 1.0 270 < th dose dependent rect. 19 8
545 221.35 wind 1.0 270 > th dose independent rect. 14 16
553 221.37 temperature 10.0 90 > th dose independent rect. 21 19
564 221.40 humidity 50.0 10 > th dose independent rect. 16 5
566 221.42 atmosphere 1015.0 10 < th dose independent rect. 16 16
573 221.48 atmosphere 1000.0 10 > th dose independent rect. 3 18
575 221.49 radiation 1.0 270 < th dose independent rect. 15 12
577 221.50 wind 9.0 10 < th dose independent rect. 16 16
594 221.59 atmosphere 995.0 10 > th dose dependent rect. 16 5
603 221.62 radiation 1.0 270 < th dose independent sin 14 NA
626 221.71 radiation 40.0 10 < th dose dependent rect. 11 23
696 222.03 wind 1.0 270 > th dose independent rect. 3 16
713 222.07 humidity 90.0 270 < th dose dependent rect. 15 4
719 222.10 atmosphere 995.0 270 > th dose independent rect. 6 9
725 222.12 radiation 1.0 270 < th dose dependent rect. 10 17
732 222.14 precipitation 0.1 270 < th dose independent rect. 19 8
733 222.14 precipitation 0.1 270 < th dose dependent rect. 19 8
770 222.23 precipitation 0.1 90 < th dose independent rect. 16 16
773 222.23 precipitation 0.1 90 < th dose dependent rect. 16 16
778 222.25 radiation 10.0 10 < th dose independent rect. 12 9
779 222.26 radiation 10.0 10 < th dose independent rect. 6 15
812 222.31 wind 1.0 270 > th dose independent rect. 19 7
814 222.31 radiation 1.0 90 > th dose dependent rect. 7 9
820 222.34 atmosphere 995.0 10 > th dose dependent rect. 16 7
835 222.41 temperature 10.0 1440 > th dose independent rect. 17 5
838 222.41 radiation 30.0 1440 < th dose independent rect. 17 5
851 222.41 temperature 10.0 1440 > th dose independent rect. 22 19
857 222.42 precipitation 0.1 10 < th dose independent rect. 16 5
858 222.42 humidity 90.0 10 < th dose independent rect. 8 8
860 222.42 precipitation 0.1 10 < th dose dependent rect. 16 5
875 222.49 humidity 90.0 90 < th dose dependent rect. 17 4
895 222.60 atmosphere 995.0 90 > th dose independent rect. 8 8
949 222.76 radiation 30.0 10 < th dose dependent rect. 14 19
955 222.80 humidity 50.0 270 > th dose independent rect. 19 19
976 222.88 temperature 15.0 90 > th dose dependent rect. 16 7
978 222.88 radiation 40.0 10 < th dose dependent rect. 13 23