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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0573100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.36 (0.0468) R2 : 0.0639
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.549 (0.0984) R2dN8 : 0.0825 R2N8 : 0.0639
σ : 0.88
deviance : 355.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
326.87 0.849 3.44 -0.792 0.172 3.14 -0.37 -13.3 -0.471 4.12 1003 79 -- --
337.87 0.856 3.32 -0.231 0.166 0.967 -0.124 -- -0.393 4.96 1008 138 -- --
325.68 0.841 3.45 -0.833 0.161 3.61 -- -16 -0.496 3.32 1003 123 -- --
337.91 0.856 3.32 -0.235 0.162 0.957 -- -- -0.39 5.13 1008 149 -- --
326.66 0.842 3.48 -0.972 -- 3.99 -- -18.3 -0.475 -- 1003 144 -- --
354.18 0.882 3.36 -0.171 0.12 -- -0.241 -- -0.572 5.11 -- -- -- --
354.32 0.881 3.36 -0.171 0.119 -- -- -- -0.571 4.66 -- -- -- --
339.24 0.858 3.33 -0.23 -- 0.941 -- -- -0.391 -- 1008 169 -- --
339.35 0.858 3.32 -- 0.156 0.937 -- -- -0.367 5.28 1008 169 -- --
355.07 0.88 3.37 -0.166 -- -- -- -- -0.568 -- -- -- -- --
355.09 0.881 3.36 -- 0.116 -- -- -- -0.552 4.7 -- -- -- --
340.61 0.86 3.32 -- -- 0.916 -- -- -0.371 -- 1008 169 -- --
355.8 0.88 3.36 -- -- -- -- -- -0.549 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 329.52 wind 3 90 < th dose dependent rect. 15 2
2 329.76 wind 3 90 < th dose independent rect. 15 2
7 329.87 atmosphere 1005 90 < th dose dependent rect. 11 13
8 329.93 wind 1 90 < th dose dependent rect. 14 7
85 332.05 atmosphere 1000 720 > th dose independent rect. 17 16
90 332.15 atmosphere 1005 10 < th dose dependent sin 18 NA
99 332.35 atmosphere 1005 90 < th dose dependent rect. 4 21
111 332.79 atmosphere 1005 270 < th dose dependent rect. 19 21
112 332.80 atmosphere 1005 10 < th dose dependent rect. 5 20
126 333.02 atmosphere 1005 90 < th dose dependent rect. 11 6
132 333.11 atmosphere 1005 90 < th dose dependent rect. 21 19
143 333.35 atmosphere 1005 90 < th dose dependent rect. 10 21
168 333.74 atmosphere 1005 10 < th dose dependent rect. 11 21
180 333.85 atmosphere 1000 1440 > th dose independent rect. 21 19
207 334.13 atmosphere 1000 1440 < th dose independent rect. 21 19
209 334.14 atmosphere 1000 1440 < th dose dependent rect. 19 5
214 334.21 atmosphere 1005 90 < th dose dependent rect. 7 18
232 334.32 atmosphere 1005 10 < th dose dependent rect. 8 17
233 334.32 atmosphere 1005 10 < th dose dependent rect. 20 21
246 334.40 atmosphere 1000 1440 > th dose independent sin 4 NA
276 334.61 atmosphere 1005 90 < th dose dependent rect. 14 1
281 334.65 atmosphere 1000 1440 < th dose independent sin 4 NA
295 334.70 humidity 60 30 < th dose dependent rect. 12 4
296 334.70 atmosphere 1005 10 < th dose dependent rect. 14 10
312 334.81 atmosphere 1000 720 < th dose dependent rect. 16 14
334 334.91 atmosphere 1005 10 < th dose dependent rect. 16 1
350 334.99 atmosphere 1005 10 < th dose dependent rect. 14 3
358 335.02 atmosphere 1000 1440 < th dose independent rect. 15 21
367 335.05 atmosphere 1005 10 < th dose dependent rect. 18 23
378 335.10 atmosphere 1000 1440 > th dose independent sin 11 NA
382 335.12 atmosphere 1000 1440 > th dose independent rect. 16 20
405 335.19 atmosphere 1000 720 < th dose dependent sin 13 NA
421 335.24 atmosphere 1000 720 < th dose dependent rect. 17 11
438 335.28 atmosphere 1000 720 > th dose independent rect. 16 8
458 335.32 atmosphere 1000 1440 < th dose independent sin 12 NA
532 335.54 humidity 60 10 < th dose independent rect. 15 1
538 335.55 humidity 60 90 < th dose independent rect. 15 1
545 335.57 atmosphere 1000 720 < th dose independent rect. 18 7
580 335.66 radiation 10 30 > th dose dependent rect. 15 2
612 335.71 atmosphere 1005 10 < th dose dependent rect. 2 23
669 335.82 atmosphere 1000 720 < th dose independent rect. 17 13
724 335.89 atmosphere 1005 90 < th dose dependent no NA NA
763 335.95 atmosphere 1000 1440 > th dose independent no NA NA
779 335.99 radiation 40 90 > th dose independent rect. 15 1
799 335.99 atmosphere 1000 1440 < th dose independent rect. 17 23
801 335.99 radiation 40 90 > th dose dependent rect. 15 1
822 336.00 atmosphere 1000 1440 > th dose independent rect. 7 23
830 336.01 atmosphere 1000 720 > th dose independent rect. 12 16
834 336.02 atmosphere 1000 1440 < th dose independent no NA NA
846 336.03 atmosphere 1005 90 < th dose dependent rect. 13 23
856 336.06 atmosphere 1000 1440 > th dose independent rect. 11 23
857 336.06 atmosphere 1000 1440 > th dose independent rect. 24 23
874 336.08 atmosphere 1000 1440 > th dose independent rect. 3 23
908 336.12 atmosphere 1000 1440 < th dose independent rect. 7 23
944 336.14 atmosphere 1000 1440 < th dose independent rect. 11 23
955 336.16 atmosphere 1000 1440 < th dose dependent rect. 20 1
957 336.17 atmosphere 1000 1440 < th dose independent rect. 3 23