Os11g0569800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor kinase-like protein.
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Os11g0569800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 237.65 | 0.724 | 5.74 | -1.83 | 0.596 | -3.04 | -0.37 | -0.329 | -0.287 | 23.7 | 23.54 | 46 | 10.8 | -- |
| 237.69 | 0.718 | 5.74 | -1.86 | 0.596 | -3.05 | -0.489 | -- | -0.289 | 23.7 | 23.49 | 51 | 10.7 | -- |
| 237.95 | 0.724 | 5.73 | -1.78 | 0.588 | -2.9 | -- | -0.714 | -0.28 | 23.6 | 23.54 | 46 | 10.8 | -- |
| 238.54 | 0.724 | 5.74 | -1.85 | 0.581 | -2.84 | -- | -- | -0.289 | 23.6 | 23.49 | 51 | 10.7 | -- |
| 254.57 | 0.743 | 5.7 | -1.73 | -- | -2.44 | -- | -0.594 | -0.224 | -- | 23.38 | 59 | 11.8 | -- |
| 323.37 | 0.843 | 5.65 | -1.38 | 0.18 | -- | 0.102 | -- | 0.0261 | 3.85 | -- | -- | -- | -- |
| 323.4 | 0.842 | 5.65 | -1.38 | 0.18 | -- | -- | -- | 0.0256 | 3.75 | -- | -- | -- | -- |
| 255.03 | 0.744 | 5.71 | -1.79 | -- | -2.37 | -- | -- | -0.235 | -- | 23.4 | 61 | 11.7 | -- |
| 320.98 | 0.839 | 5.67 | -- | 0.476 | -2.31 | -- | -- | -0.0217 | 24 | 23.38 | 38 | 10 | -- |
| 325.19 | 0.843 | 5.65 | -1.37 | -- | -- | -- | -- | 0.0304 | -- | -- | -- | -- | -- |
| 373.57 | 0.904 | 5.62 | -- | 0.153 | -- | -- | -- | 0.179 | 3.83 | -- | -- | -- | -- |
| 332.36 | 0.852 | 5.66 | -- | -- | -1.9 | -- | -- | 0.0242 | -- | 23.1 | 9 | 10.5 | -- |
| 374.85 | 0.904 | 5.62 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 240.25 | temperature | 25.0 | 90 | < th | dose dependent | sin | 17 | NA |
| 2 | 241.06 | temperature | 25.0 | 270 | < th | dose dependent | sin | 19 | NA |
| 3 | 241.53 | temperature | 25.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 11 | 244.89 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 14 |
| 15 | 245.11 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 12 |
| 16 | 245.40 | temperature | 10.0 | 10 | > th | dose dependent | sin | 15 | NA |
| 18 | 245.56 | temperature | 10.0 | 90 | > th | dose dependent | sin | 15 | NA |
| 29 | 246.29 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 37 | 246.90 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 13 | 10 |
| 43 | 247.03 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 46 | 247.11 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 15 |
| 128 | 250.58 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 138 | 250.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 139 | 251.05 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 144 | 251.24 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 150 | 251.54 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 151 | 251.57 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 152 | 251.57 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 153 | 251.61 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 159 | 252.12 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 160 | 252.12 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 161 | 252.13 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 162 | 252.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 177 | 252.59 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 189 | 252.82 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 200 | 253.00 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 204 | 253.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 207 | 253.17 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 22 | 6 |
| 238 | 253.55 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 239 | 253.57 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 252 | 253.69 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 22 | 8 |
| 260 | 253.77 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 268 | 253.86 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 286 | 253.98 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 288 | 253.99 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 294 | 254.03 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 303 | 254.06 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 317 | 254.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 373 | 254.67 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 376 | 254.73 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 381 | 254.79 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 388 | 254.83 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 464 | 255.41 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 11 | 13 |
| 493 | 255.59 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 12 | 18 |
| 506 | 255.66 | atmosphere | 1015.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 514 | 255.69 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 518 | 255.71 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 520 | 255.71 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 19 | 5 |
| 548 | 255.84 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 552 | 255.85 | temperature | 20.0 | 4320 | < th | dose dependent | sin | 10 | NA |
| 634 | 256.16 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 22 | 16 |
| 635 | 256.17 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 672 | 256.30 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 735 | 256.49 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 789 | 256.59 | atmosphere | 1015.0 | 14400 | > th | dose dependent | sin | 18 | NA |
| 868 | 256.74 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 873 | 256.75 | atmosphere | 1015.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 888 | 256.80 | atmosphere | 1015.0 | 43200 | > th | dose independent | sin | 15 | NA |