Os11g0569500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor kinase-like protein.
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Os11g0569500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.15 | 0.47 | 6.87 | -0.978 | 0.616 | -2.5 | 1.07 | 1.56 | -0.0235 | 18.3 | 22.41 | 1901 | -- | -- |
| 102.5 | 0.472 | 6.85 | -0.843 | 0.621 | -2.99 | 1.09 | -- | -0.00281 | 18.4 | 21.92 | 1881 | -- | -- |
| 102.79 | 0.472 | 6.87 | -0.991 | 0.618 | -2.58 | -- | 1.54 | -0.0155 | 18.1 | 22.31 | 1865 | -- | -- |
| 104.69 | 0.477 | 6.84 | -0.825 | 0.62 | -2.96 | -- | -- | 0.0299 | 18 | 21.83 | 1901 | -- | -- |
| 122.9 | 0.516 | 6.86 | -1 | -- | -2.58 | -- | 1.31 | -0.0339 | -- | 22.33 | 1930 | -- | -- |
| 189.51 | 0.645 | 6.74 | 0.116 | 0.642 | -- | 1.19 | -- | 0.473 | 18.5 | -- | -- | -- | -- |
| 192.94 | 0.65 | 6.74 | 0.1 | 0.65 | -- | -- | -- | 0.478 | 18.3 | -- | -- | -- | -- |
| 124.52 | 0.52 | 6.83 | -0.866 | -- | -2.91 | -- | -- | 0.0042 | -- | 21.96 | 1949 | -- | -- |
| 117.49 | 0.505 | 6.81 | -- | 0.679 | -2.45 | -- | -- | 0.155 | 18.2 | 22.8 | 1613 | -- | -- |
| 214.86 | 0.685 | 6.72 | 0.0828 | -- | -- | -- | -- | 0.464 | -- | -- | -- | -- | -- |
| 193.2 | 0.65 | 6.74 | -- | 0.649 | -- | -- | -- | 0.467 | 18.3 | -- | -- | -- | -- |
| 139.2 | 0.55 | 6.8 | -- | -- | -2.3 | -- | -- | 0.14 | -- | 22.7 | 1873 | -- | -- |
| 215.04 | 0.684 | 6.73 | -- | -- | -- | -- | -- | 0.454 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 6 | 103.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 11 |
| 10 | 104.05 | temperature | 20 | 1440 | < th | dose independent | sin | 4 | NA |
| 13 | 104.23 | temperature | 20 | 1440 | > th | dose independent | sin | 4 | NA |
| 49 | 105.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 21 |
| 111 | 106.05 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 130 | 106.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 21 |
| 168 | 106.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 170 | 106.48 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 195 | 106.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 199 | 106.69 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 214 | 106.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 253 | 107.11 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 260 | 107.17 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 261 | 107.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 10 |
| 270 | 107.27 | temperature | 25 | 1440 | < th | dose dependent | sin | 3 | NA |
| 273 | 107.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 15 | 8 |
| 277 | 107.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 19 |
| 289 | 107.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 313 | 107.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 10 |
| 314 | 107.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 12 | 12 |
| 333 | 107.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 21 |
| 392 | 107.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 394 | 107.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 12 |
| 415 | 107.89 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 424 | 107.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 428 | 107.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 9 |
| 440 | 108.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 6 |
| 551 | 108.58 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 562 | 108.66 | temperature | 20 | 4320 | < th | dose dependent | rect. | 20 | 14 |
| 600 | 108.87 | temperature | 20 | 4320 | < th | dose dependent | rect. | 20 | 8 |
| 653 | 109.11 | temperature | 20 | 4320 | < th | dose dependent | sin | 8 | NA |
| 755 | 109.59 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 777 | 109.65 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 787 | 109.69 | temperature | 20 | 4320 | > th | dose independent | sin | 18 | NA |
| 863 | 109.98 | temperature | 20 | 4320 | < th | dose independent | sin | 18 | NA |
| 866 | 109.99 | temperature | 20 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 897 | 110.08 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 932 | 110.20 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |