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Os11g0568600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : THUMP domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.64 (0.0224) R2 : 0.526
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.3 (0.0587) R2dC : 0.511 R2C : 0.509
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.167 (0.0471) R2dN8 : 0.0168 R2N8 : 0.0153
σ : 0.422
deviance : 81.52
__
_____
C
peak time of C : 17.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.17 0.388 9.62 0.508 1.48 0.537 0.518 0.562 -0.113 16 0.005307 30 -- --
69.62 0.389 9.62 0.517 1.47 0.529 0.106 -- -0.107 16 6.497e-05 29 -- --
68.83 0.386 9.62 0.521 1.48 0.546 -- 0.435 -0.0945 16 0.05103 31 -- --
69.49 0.388 9.61 0.514 1.5 0.545 -- -- -0.106 16.1 0.05 43 -- --
107.29 0.482 9.63 0.367 -- -1.25 -- -0.258 -0.247 -- 186.4 708 -- --
75.68 0.408 9.63 0.459 1.3 -- 0.376 -- -0.118 17.7 -- -- -- --
76.02 0.408 9.63 0.457 1.31 -- -- -- -0.116 17.7 -- -- -- --
82.38 0.423 9.67 0.159 -- -1.46 -- -- -0.292 -- 4.604e-06 689 -- --
76.49 0.407 9.63 -- 1.47 0.505 -- -- -0.147 16.1 0.04467 48 -- --
164.51 0.599 9.61 0.415 -- -- -- -- -0.147 -- -- -- -- --
81.52 0.422 9.64 -- 1.3 -- -- -- -0.167 17.7 -- -- -- --
83.48 0.426 9.66 -- -- -1.51 -- -- -0.219 -- 0.005106 695 -- --
169.06 0.607 9.62 -- -- -- -- -- -0.193 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.34 wind 5.0 270 < th dose independent rect. 3 3
2 58.67 temperature 10.0 270 > th dose dependent rect. 3 3
3 58.71 wind 7.0 270 < th dose dependent rect. 3 3
5 58.80 precipitation 0.1 270 < th dose independent rect. 3 3
6 58.80 precipitation 0.1 270 < th dose dependent rect. 3 3
7 59.11 wind 7.0 10 < th dose dependent rect. 4 5
8 59.12 wind 9.0 270 < th dose independent rect. 6 21
12 59.20 temperature 10.0 90 > th dose dependent rect. 3 5
15 59.26 wind 7.0 270 < th dose dependent rect. 4 1
16 59.28 wind 5.0 270 < th dose independent rect. 4 1
19 59.32 wind 5.0 270 < th dose independent rect. 2 5
31 59.53 temperature 15.0 90 > th dose independent rect. 14 18
36 59.58 temperature 10.0 270 > th dose independent rect. 3 3
38 59.58 temperature 30.0 270 < th dose independent rect. 3 3
39 59.58 humidity 50.0 270 > th dose independent rect. 3 3
42 59.58 atmosphere 995.0 270 > th dose independent rect. 3 3
43 59.58 atmosphere 1015.0 270 < th dose independent rect. 3 3
44 59.58 radiation 20.0 270 < th dose independent rect. 3 3
47 59.58 temperature 10.0 270 > th dose independent rect. 6 21
49 59.65 humidity 50.0 270 > th dose dependent rect. 3 3
50 59.67 temperature 10.0 10 > th dose dependent rect. 4 5
56 59.69 radiation 40.0 270 < th dose dependent rect. 3 3
67 59.87 temperature 10.0 90 > th dose dependent rect. 8 6
69 59.89 wind 9.0 90 < th dose independent rect. 8 20
71 59.92 precipitation 0.1 270 < th dose independent rect. 2 5
72 59.92 precipitation 0.1 270 < th dose dependent rect. 2 5
73 59.95 wind 9.0 10 < th dose independent rect. 9 19
75 59.96 wind 9.0 270 < th dose independent rect. 5 23
83 60.01 precipitation 0.1 10 < th dose independent rect. 4 5
85 60.01 precipitation 0.1 10 < th dose dependent rect. 4 5
90 60.05 temperature 15.0 10 > th dose independent rect. 14 19
103 60.14 temperature 10.0 30 > th dose independent rect. 4 5
105 60.14 temperature 30.0 30 < th dose independent rect. 4 5
106 60.14 humidity 50.0 30 > th dose independent rect. 4 5
108 60.14 atmosphere 995.0 30 > th dose independent rect. 4 5
109 60.14 atmosphere 1015.0 30 < th dose independent rect. 4 5
110 60.14 temperature 10.0 30 > th dose independent rect. 9 19
146 60.27 humidity 50.0 30 > th dose independent rect. 9 19
147 60.27 temperature 10.0 10 > th dose dependent rect. 14 19
149 60.30 humidity 50.0 270 > th dose dependent rect. 4 1
159 60.39 temperature 10.0 270 > th dose dependent rect. 9 1
160 60.40 temperature 15.0 90 > th dose independent rect. 8 6
165 60.42 temperature 10.0 270 > th dose independent rect. 4 1
167 60.42 temperature 30.0 270 < th dose independent rect. 4 1
168 60.42 humidity 50.0 270 > th dose independent rect. 4 1
171 60.42 atmosphere 995.0 270 > th dose independent rect. 4 1
172 60.42 atmosphere 1010.0 270 < th dose independent rect. 4 1
174 60.42 radiation 20.0 270 < th dose independent rect. 4 1
180 60.42 temperature 10.0 270 > th dose independent rect. 5 23
181 60.42 temperature 10.0 10 > th dose dependent rect. 9 5
191 60.44 radiation 40.0 270 < th dose dependent rect. 4 1
198 60.48 temperature 10.0 90 > th dose dependent rect. 14 18
202 60.51 radiation 1.0 270 < th dose independent rect. 4 1
205 60.51 radiation 1.0 270 < th dose dependent rect. 4 1
209 60.52 humidity 50.0 90 > th dose independent rect. 8 6
238 60.55 humidity 90.0 90 < th dose independent rect. 8 6
249 60.59 radiation 40.0 270 < th dose dependent rect. 2 5
258 60.63 precipitation 0.1 270 < th dose independent rect. 6 21
259 60.63 precipitation 0.1 270 < th dose dependent rect. 6 21
265 60.68 humidity 50.0 270 > th dose dependent rect. 2 5
273 60.71 temperature 10.0 270 > th dose dependent rect. 8 3
276 60.74 wind 9.0 90 < th dose independent rect. 8 6
294 60.76 precipitation 0.1 90 < th dose independent rect. 8 6
296 60.76 precipitation 0.1 90 < th dose dependent rect. 8 6
298 60.77 precipitation 0.1 30 < th dose independent rect. 9 19
301 60.77 precipitation 0.1 30 < th dose dependent rect. 9 19
303 60.78 wind 7.0 270 < th dose independent rect. 17 10
325 60.86 precipitation 0.1 90 < th dose independent rect. 14 18
328 60.86 precipitation 0.1 90 < th dose dependent rect. 14 18
330 60.87 atmosphere 995.0 90 > th dose independent rect. 8 6
331 60.87 atmosphere 1015.0 90 < th dose independent rect. 8 6
341 60.92 radiation 40.0 90 < th dose independent rect. 14 18
344 60.93 radiation 1.0 90 > th dose independent rect. 8 6
346 60.93 atmosphere 1015.0 90 < th dose independent rect. 14 18
352 60.96 atmosphere 995.0 30 > th dose independent rect. 9 19
355 60.97 precipitation 0.1 270 < th dose independent rect. 3 14
358 60.97 precipitation 0.1 270 < th dose dependent rect. 3 14
360 60.98 wind 1.0 90 > th dose independent rect. 8 6
410 61.08 wind 9.0 270 < th dose dependent rect. 7 6
420 61.15 precipitation 0.1 10 < th dose independent rect. 14 19
421 61.15 atmosphere 1015.0 270 < th dose dependent rect. 3 2
422 61.15 precipitation 0.1 10 < th dose dependent rect. 14 19
424 61.17 radiation 1.0 270 > th dose independent rect. 9 1
430 61.18 wind 9.0 90 < th dose independent rect. 14 18
432 61.19 atmosphere 1015.0 30 < th dose dependent rect. 4 5
435 61.20 radiation 20.0 270 < th dose independent rect. 1 7
463 61.28 temperature 15.0 270 > th dose independent rect. 9 1
471 61.31 atmosphere 1015.0 10 < th dose independent rect. 14 19
478 61.34 radiation 1.0 10 > th dose independent rect. 9 5
488 61.36 wind 9.0 10 < th dose independent rect. 9 5
492 61.37 atmosphere 995.0 90 > th dose independent rect. 14 18
529 61.42 humidity 50.0 270 > th dose independent rect. 6 21
535 61.43 temperature 10.0 10 > th dose independent rect. 9 5
537 61.43 atmosphere 995.0 10 > th dose independent rect. 9 5
538 61.43 atmosphere 1015.0 10 < th dose independent rect. 9 5
539 61.43 precipitation 0.1 10 < th dose independent rect. 9 5
542 61.43 precipitation 0.1 10 < th dose dependent rect. 9 5
547 61.45 humidity 90.0 10 < th dose independent rect. 9 5
549 61.46 wind 1.0 10 > th dose independent rect. 9 5
570 61.53 wind 7.0 270 < th dose independent rect. 9 1
579 61.55 radiation 10.0 10 < th dose dependent sin 12 NA
609 61.61 wind 9.0 270 < th dose dependent rect. 8 3
615 61.62 radiation 40.0 270 < th dose dependent rect. 17 10
616 61.63 temperature 10.0 270 > th dose independent rect. 17 10
617 61.63 radiation 20.0 270 < th dose independent rect. 17 10
620 61.63 temperature 10.0 270 > th dose independent rect. 3 14
621 61.63 atmosphere 1015.0 270 < th dose independent rect. 3 14
623 61.63 temperature 15.0 270 > th dose independent rect. 11 21
634 61.66 radiation 1.0 10 > th dose independent rect. 5 4
674 61.70 humidity 50.0 270 > th dose independent rect. 9 1
680 61.73 radiation 1.0 270 > th dose independent rect. 8 3
681 61.73 wind 9.0 10 < th dose independent rect. 14 19
698 61.76 precipitation 0.1 270 < th dose independent rect. 9 1
703 61.76 precipitation 0.1 270 < th dose dependent rect. 9 1
714 61.79 temperature 15.0 270 > th dose independent rect. 8 3
745 61.85 temperature 10.0 1440 > th dose independent rect. 10 5
749 61.85 temperature 10.0 1440 > th dose independent rect. 15 19
757 61.86 atmosphere 995.0 270 > th dose independent rect. 9 1
758 61.86 atmosphere 1015.0 270 < th dose independent rect. 9 1
762 61.86 temperature 10.0 270 > th dose independent rect. 10 23
773 61.87 radiation 40.0 10 < th dose independent rect. 14 19
777 61.88 atmosphere 1010.0 270 < th dose independent rect. 12 10
788 61.91 atmosphere 995.0 10 > th dose independent rect. 14 19
830 61.97 humidity 90.0 270 < th dose independent rect. 8 3
841 61.99 radiation 1.0 10 < th dose independent sin 11 NA
848 61.99 atmosphere 995.0 270 > th dose independent rect. 6 21
857 62.00 radiation 1.0 270 < th dose independent rect. 3 8
870 62.02 wind 7.0 270 < th dose independent rect. 8 3
891 62.05 radiation 1.0 270 < th dose dependent rect. 3 8
893 62.06 humidity 90.0 270 < th dose independent rect. 9 1
917 62.07 humidity 50.0 270 > th dose independent rect. 17 10
926 62.07 radiation 1.0 90 > th dose independent rect. 14 18
932 62.08 temperature 15.0 270 > th dose independent rect. 12 10
997 62.17 atmosphere 995.0 270 > th dose independent rect. 17 10